Microsatellites /Tandem Repeats database

Genome: Neisseria meningitidis WUE 2594

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
131947AAAAAGCCAAACAGA-AAAAAGCCAAACAGA-AAAAAGCCAAACAGA-AAAAAGCCAAACAGA-AAAAAGCCAAACAGADesign primers
132030AAACAGAAAAAAGCC-AAACAGAAAAAAGCC-AAACAGAAAAAAGCC-AAACAGAAAAAAGCC-AAACAGAAAAAAGCCDesign primers
187810ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTTDesign primers
220687GCGGGAATGACGGAGAGTT-GCGGGAATGACGGAGAGTT-GCGGGAATGACGGAGAGTT-GCGGGAATGACGGAGAGTTDesign primers
586061AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAACDesign primers
691604CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCTDesign primers
1009815TGTAGAGATGGC-TGTAGAGATGGC-TGTAGAGATGGC-TGTAGAGATGGC-TGTAGAGATGGC-TGTAGAGATGGC-TGTAGAGATGGCDesign primers
1009900GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCTDesign primers
1139438TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGGDesign primers
1295634GCGTGCGGACGTATTCTGCCT-GCGTGCGGACGTATTCTGCCT-GCGTGCGGACGTATTCTGCCTDesign primers
1376712GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGADesign primers
1581411CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCTDesign primers
1750400CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCTDesign primers
1931029GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTTDesign primers
1966022GGCAACTTT-GGCAACTTT-GGCAACTTT-GGCAACTTT-GGCAACTTT-GGCAACTTT-GGCAACTTTDesign primers
1966086GCAGCTTTG-GCAGCTTTG-GCAGCTTTG-GCAGCTTTGDesign primers
2036381CACCAATCA-CACCAATCA-CACCAATCA-CACCAATCA-CACCAATCA-CACCAATCADesign primers

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