This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 131947 | AAAAAGCCAAACAGA-AAAAAGCCAAACAGA-AAAAAGCCAAACAGA-AAAAAGCCAAACAGA-AAAAAGCCAAACAGA | Design primers |
| 132030 | AAACAGAAAAAAGCC-AAACAGAAAAAAGCC-AAACAGAAAAAAGCC-AAACAGAAAAAAGCC-AAACAGAAAAAAGCC | Design primers |
| 187810 | ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT-ATTT | Design primers |
| 220687 | GCGGGAATGACGGAGAGTT-GCGGGAATGACGGAGAGTT-GCGGGAATGACGGAGAGTT-GCGGGAATGACGGAGAGTT | Design primers |
| 586061 | AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC-AAACAAC | Design primers |
| 691604 | CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT-CATTTCT | Design primers |
| 1009815 | TGTAGAGATGGC-TGTAGAGATGGC-TGTAGAGATGGC-TGTAGAGATGGC-TGTAGAGATGGC-TGTAGAGATGGC-TGTAGAGATGGC | Design primers |
| 1009900 | GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT-GTAGAGATAGCT | Design primers |
| 1139438 | TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG-TTGGG | Design primers |
| 1295634 | GCGTGCGGACGTATTCTGCCT-GCGTGCGGACGTATTCTGCCT-GCGTGCGGACGTATTCTGCCT | Design primers |
| 1376712 | GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA | Design primers |
| 1581411 | CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT | Design primers |
| 1750400 | CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT | Design primers |
| 1931029 | GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT | Design primers |
| 1966022 | GGCAACTTT-GGCAACTTT-GGCAACTTT-GGCAACTTT-GGCAACTTT-GGCAACTTT-GGCAACTTT | Design primers |
| 1966086 | GCAGCTTTG-GCAGCTTTG-GCAGCTTTG-GCAGCTTTG | Design primers |
| 2036381 | CACCAATCA-CACCAATCA-CACCAATCA-CACCAATCA-CACCAATCA-CACCAATCA | Design primers |
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