This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 78340 | TATAAGTA-TATAAGTA-TATAAGTA | Design primers |
| 288408 | GCCAAAGCT-GCCAAAGCT-GCCAAAGCT-GCCAAAGCT | Design primers |
| 288445 | CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG-CCAAAGTTG | Design primers |
| 329740 | AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC | Design primers |
| 378222 | GGGAAAATACGAT-GGGAAAATACGAT-GGGAAAATACGAT-GGGAAAATACGAT | Design primers |
| 466344 | GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA | Design primers |
| 491432 | GGTAAAAAC-GGTAAAAAC-GGTAAAAAC | Design primers |
| 733906 | GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA-GAAGA | Design primers |
| 736101 | GCGGGAATGACGAAAAGTG-GCGGGAATGACGAAAAGTG-GCGGGAATGACGAAAAGTG-GCGGGAATGACGAAAAGTG | Design primers |
| 736196 | GCGGGAATGACGAAAAGTG-GCGGGAATGACGAAAAGTG-GCGGGAATGACGAAAAGTG | Design primers |
| 874273 | TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC | Design primers |
| 915198 | CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT | Design primers |
| 1023141 | TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC-TGGC | Design primers |
| 1148116 | CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC-CCAAC | Design primers |
| 1280629 | TCTCTACAACCCA-TCTCTACAACCCA-TCTCTACAACCCA | Design primers |
| 1280679 | ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT | Design primers |
| 1280775 | ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT-ATCTCTACAGCT | Design primers |
| 1280956 | TCTCTACAGCCA-TCTCTACAGCCA-TCTCTACAGCCA-TCTCTACAGCCA-TCTCTACAGCCA | Design primers |
| 1434867 | CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT-CTTCT | Design primers |
| 1602679 | ATGAGAA-ATGAGAA-ATGAGAA-ATGAGAA-ATGAGAA | Design primers |
| 1717651 | TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT-TGTTGTT | Design primers |
| 1957534 | TTCGGGTATTCCTGACGA-TTCGGGTATTCCTGACGA-TTCGGGTATTCCTGACGA | Design primers |
| 1957589 | TCAGGTATTCCTGACGAT-TCAGGTATTCCTGACGAT-TCAGGTATTCCTGACGAT-TCAGGTATTCCTGACGAT-TCAGGTATTCCTGACGAT-TCAGGTATTCCTGACGAT | Design primers |
| 2000379 | AAGG-AAGG-AAGG-AAGG-AAGG-AAGG-AAGG | Design primers |
| 2111364 | AAAT-AAAT-AAAT-AAAT-AAAT-AAAT-AAAT-AAAT-AAAT-AAAT-AAAT-AAAT | Design primers |
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