Microsatellites /Tandem Repeats database

Genome: Sinorhizobium meliloti BL225C

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
82902CTGTTGCGCCTGCTGCGCCTGTTCCGCDesign primers
101247GCC-GGC-GGC-GGC-GGC-GGC-GGC-GGCDesign primers
101408CGGCGGCAGCGGCGGCGGGGGCGGGGGCGGDesign primers
251716GATGCCGGTGCCGATGCTGATCCCGATGGCDesign primers
252046CTGCCGGTGCCGCTCAGACGGTGCCGCTCAGACGGTGCCGCTDesign primers
275940GGCTTCGGCTCCGACTTCGGCTTCDesign primers
393808TGCGGCCGGGCGGCCGGCCGGGCGAGCGGCCCGGCGGCCGGCCGGGCGAGCGGCCCGGCGDesign primers
420966CTCGGCCACTCGGCCTTTCGGCCADesign primers
481323GGCCAAGGCGAAGGCCAAGGCCGADesign primers
497950CGGCGGTGGCGGGGGCGGCGGCGGCGGTGGCGGCTGDesign primers
605010CGCCGATGCCGACGCAGACGCCGADesign primers
739124GACGATGGCGATGACGACGACGAGDesign primers
840703GGGGCGAA-GGGGCGAA-GGGGCTAADesign primers
858431GCCCTCAACCCTGTGCCCACATCCCTGTGCCCACATCCCTGTDesign primers
1051695GGAAAAGAAAAAGGAAGAGGACAADesign primers
1062913GGCTACGGCGACGGCTATCGCTACDesign primers
1174433GTCGGCGTCGTCGTCGGCGGCGGCDesign primers
1242650CCGAGGTGATCGTCACCT-CCGAGGTGATCGTCACCT-CCAAGGTGATCGCCGCCT-CCGAGGTGAGTGTCACCTDesign primers
1275141CTTTAACTTTGACTTTATCTTTAADesign primers
1286223CACGGCACCGCAGGGCAGGGCACGTDesign primers
1653352CGAGCG-CGAGCG-CGCGCG-CAAGCGDesign primers
1724603CCC-GGC-GGC-GGT-GGC-GGC-GGC-GGC-GGT-GGC-GGC-GGC-GGC-GGC-GGT-GGC-GGC-GGT-GGC-GGC-GGT-GGC-GGC-GGC-GGC-GGC-GGC-GGCDesign primers
1724707CCAAGACACCGGCAAGGGTAACCAAGACCATGGCAAGGGCAACCAGGACAACGGCAAGGGCAGDesign primers
1724771CAGGACAATGGCAAGGGCAGCCAGGATAACGGCAAAGGCAGCCAGGACAACGGCAAGGGCAGCDesign primers
1763457CTGGCTTTC-CTGGCTTTC-CTGCCTTTCDesign primers
1777222AGGCTCCGGCGGCGGCCAGGATACCGGCTCTGGTGGCGGTCAGGATACCGGCTCTGGCGGCGGTCAGGACACCGGCTCCGGTGGTGGCCAGGATAGDesign primers
1788645CTCGTCTTCTTCCTGGCCTTCTTCCTCGATTTCTTCDesign primers
1837462GACAAGGGGAAGAAGGGGCAGGACACGGGCAAGAAGGGGCAGGACACCGGCAAGAAGGGCCAGDesign primers
1949453TCGGCATCGTCATCGGCGTCGGCTDesign primers
1951710GGCGGCGGCGGTGTTGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGCGGCGGTGGCGGCGGTGGCGGCDesign primers
1951801GCGGCGACAATGGCGGTGGCGGCG-GCGGCGACAATGGCGGTGGCGGCG-GCGGCGACAACGGCGGTGGCGGCG-GCGGCGACAATGGCGGTGGCGGCG-GCGGCGACAACGGCGGTGGCGGCG-GCGGCGACAACGGCGGTGGCGGCG-GCGGCGACAACGGCGGTGGCGGCGDesign primers
1952088GGCAAGGGCCACCAGGACAACGACAAGGGCAACCAGGACGGCGGCAAGGGCCACCAGGACAACDesign primers
1956840CCTTTCATCCTCGGGCTTGACCCG-GTCGTCATCCTCGGGCTTGACCCG-GTCGTCATCCTCGGGCTTGACCCGDesign primers
2041650CTCCGCCTTCGCCTTCGCCTCCTCDesign primers
2140194TCGTCGCCGTCGTCGTCGTCGTCCDesign primers
2216735CTC-GTC-GTC-GTC-CTC-CTC-CTC-TTCDesign primers
2223047CCTGCCGCCCTGCCTGCCCGCCTGCCTCCCGCCCCGDesign primers
2378365GCGGCGGTGGCGGTGGCGGCGCCGDesign primers
2556978GGCGGCGGTGGCCGCGGCGGAGGCDesign primers
2634750GATCAGGAACAGGTTCAGGAGCAGDesign primers
2823296ACGAGCACGATGAGCACGACGACCACGDesign primers
2855883GACGAG-GACGAG-GAGGAG-GAAGAGDesign primers
2994712GCCGAAGCCGCAGCCGAGGCGGAADesign primers
3006729GGCGGTCCA-GGCGGTCCA-GGCGGTTCA-GGCGTTCCADesign primers
3011912GCGCGCCTAAAATCCGACGCGCCCAAAATCCGACGTGCCCAAAATCCGDesign primers
3065341ACGGCGGCGACGGCGGCCGCGGCGGCGDesign primers
3086097CAAGATCAAGACCGAGATCCAGATDesign primers
3263058GCTCGACGCGCTCGACACGCTCGACGADesign primers
3280875GGGGTGCCAGCGGACTGGGGGCCAGCGGATTGGGGGCCAGAGGACDesign primers
3542102AGCAGGAGGAGGAACAGGAGCAGGDesign primers
3559086GTC-GTC-GTC-ATC-GTC-TTC-GTC-GTCDesign primers
3596395CACCGGTTCATCGGTTCACCTGTTDesign primers

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