This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 174875 | ATAGATT-ATAGATT-ATAGATT-ATAGATT-ATAGATT-ATAGATT-ATAGATT-ATAGATT-ATAGATT | Design primers |
| 593384 | TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG | Design primers |
| 605832 | TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG | Design primers |
| 625287 | TATATTGG-TATATTGG-TATATTGG | Design primers |
| 687407 | AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC | Design primers |
| 764607 | TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG | Design primers |
| 792520 | TCAAGTATTTCTATAGAT-TCAAGTATTTCTATAGAT-TCAAGTATTTCTATAGAT | Design primers |
| 1107741 | TTGTGTGT-TTGTGTGT-TTGTGTGT | Design primers |
| 1190439 | CTT-CTT-TTT-CTT-CTT-TTT-CTT-CTT-TTT | Design primers |
| 2473315 | ATAAAATCCTTATTTTA-ATAAAATCCTTATTTTA-ATAAAATCCTTATTTTA | Design primers |
| 3055688 | TTTTTGTAATC-TTTTTGTAATC-TTTTTGTAATC | Design primers |
| 3076645 | TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC | Design primers |
| 3519445 | TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC | Design primers |
| 3735822 | GTTGCTCCG-GTTGCTCCG-GTTGCTCCG | Design primers |
| 3924394 | TCTTCATAT-TCTTCATAT-TCTTCATAT | Design primers |
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