Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Gordonia polyisoprenivorans VH2

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
5760	ACGCCAGACCCCGAC-GGCCCAGACCCCGAC-GGCCCAGACCCCGAC	Design primers
7253	AGGTCG-AGGTCG-AGATCG-ACGTCG	Design primers
15871	TGGCCTGTGGTCCGCCGGTTTGTGGTCCGCCGGTTTGTGGTCCGC	Design primers
18642	GATTCCTCGCGTTCG-GTGCCCTCGCGTTCG-GTGCCCTCGCGTTCG-GTGCCCTCGCGTTCG	Design primers
29516	CGGGCTGCCCGTAGCCGGCCTGCTCGTGGCCCGGCTGGCCGTAGC	Design primers
33364	TGCCGAGGCCGACGCCGATGCCGG	Design primers
38316	CCGCCCGCGCCGCCCTCGCCGCCCGCG	Design primers
102800	AGCGCCTGCGCCAGCGCGAGTGCC	Design primers
248212	CCGAACGGACTACGGGCTGAACGGATCACGGGCTGAACGGATCACGGG	Design primers
275489	CGACCCCGACCACGACACCGGCCC	Design primers
365767	TCCCGACGAGGTTGCCCCAGACGAGGTTGCCCCAGAGGAGGTTGC	Design primers
380092	GAAGGCGCTGTCGGCGAGGTGAAGGGCGCTGTCGGCGGGTTGGAGGGCGCTGTCGGCGGAGTA	Design primers
386103	ACGTCCCAGAACGGTTCGGCCCAAAACGGTTCGGCCCAGAACGGT	Design primers
390514	GTGGCCTTCTTCGCCGCGGACTTCTTCGCCGCGGCTTTCTTTGCCGGTGCCTTCTTCGCG	Design primers
397836	CCACGTGCTGATCGGGCCCCTGCTGATCGGCCACCTGGTGTTCGG	Design primers
457259	CGA-CGA-AGA-CGA-CGA-TGA-AGA-CGA	Design primers
474592	TGCAGTCTCCTGATCGAGGGCAGTCTCCTGATCACGGGCAGTCACCTGATCGAG	Design primers
478862	CTCCGGCGGCCACTCCCGCGGCCTCCCCGGCGCCCA	Design primers
489532	CGCCGACAGCGCTTCTGCTGCCGCTGACAGCGCTCCGGCTCCCGCCGACAGCGCTCCCGCCGTCGCCGACAGCGCCTCGACTGC	Design primers
513179	TGGCGGCGATCGCGGCGATGGCGGCCA	Design primers
561761	GGGTGCTCGATCAGTCGGGGCTCGGTCAGTCGGTGCTCGATCAGT	Design primers
583650	TCCTCCGAGCCGGGTTCGTCCCATCCGGGTTCGTCCCATCCGGGT	Design primers
590692	CCGCCCCGCCCCGAACCCTCCCGCCCCGAACCCTCCCGTCCCGAA	Design primers
592211	CGACGCCGACCCCGACGCCGACCC	Design primers
601546	CGACGGCCACCACTGCGCAGTCCACCACTGCGCCGATCACCACTG	Design primers
601621	CGCCCCAGACCGAGT-CGCCCCAGACCGAGT-CGGCCCAGAACGCGT-CGCCGCAGAACGAGC-TGCCGCAGACCGGGT	Design primers
616847	CCGGCGAAGAAGGCGGCCGCAAAGAAGGCGCCGGCAAAGAAGGCCGCAGCGAAGAAGGCGCCGGCCAAGAAGGCG	Design primers
621508	CGTCACCGTCACGTCATCACCCTCACGTCGTCACCGTCACGTCGTCACCGTCATGA	Design primers
622416	CGGCGAAGGCGACGCCGACGACGACGGCGG	Design primers
630945	AAGACGCACACAGGCAAGTCGCATACAGGCGAGTCGCACGCAGGC	Design primers
642674	GCAGCGCGGCGGAGCGCTGCACAGC	Design primers
661086	CGCCCCGACGCCTTGCGCCCCGACCCCGTGCGCCCAGACCCCGTG	Design primers
664827	CGGGTCCCAGCCAGGTGTGTCCCAGCCAGGTGTGTCCCAGCCGGG	Design primers
667092	GGAACCTTCTGTGCCGGAACCTCGTGCGCCGGAACCTTCTGGGTG	Design primers
672419	AGATCAGCCCAGACGGAATCACCCCAGACGGAATCACCCCAGACG	Design primers
674145	GCCGACGTCGACACCGACGCCGAC	Design primers
678397	TCGATGACAAGCCGGGGGATGACAAGCCCGGGGACGACAAGCCGG	Design primers
679234	TGTCCGCGGTGTCCGGGGTGTCCGCCG	Design primers
679568	GGTCGGGCTCGGTGTCGGTGTCGG	Design primers
687449	CCACGGCCGCGGCCACCGCCCCGG	Design primers
697830	GTGGTAT-GCGGTAT-GCGGTAT-GCGGTAT	Design primers
706661	GCGAGCCCACCGGCCAGTCCACCGGCGAGCCCGCCG	Design primers
708049	CACACCGCCCAGCCCGACACCACCCAGCCCGACACCGCCCAGTGC	Design primers
708191	CCCACAGCGCCGCCGGCACCGACCGCGGCGCCGGCACCGACCGCGCCGCCGGCA	Design primers
710288	CCAACGGCGGTGCGACCGATGGGGGTGCGACGAACGGCGGTACGA	Design primers
737573	GTCGTCGGCGTCATCGTCGTCGTC	Design primers
746887	GAAGTCGACGTCGGAGTCGAAATC	Design primers
753850	ATCCAGGTAGTCGGCATCCCGGTAGCCGGCATCCCGGTAAGCGGC	Design primers
788827	CCCGCCCGGGCAGTACCCACCCGACCAGTACCCACCCGGCCAGTA	Design primers
793693	CGCTGT-CGCTGT-CGGTGT-CGGTGT-CGATGT	Design primers
826715	TTCGCCGCAGAGGTGTCGGGCGCAGAGGTGTCGGACGCAGAGGTG	Design primers
830978	CATCACCGTCACCAACACCTTCAC	Design primers
892703	CCGGCGCAGGCGCAGGCGCCGTCG	Design primers
909262	CCGCTGCCAAGAAGGCGGTCGCCAAGAAGGCCGCTGCGAAGAAGA	Design primers
909789	CCCGCCAAGAAGGCCACCAAGAAGGCCGCGAAGAAG	Design primers
909855	ACGACGGCGAAGAAGACGGCCGCCAAGAAGACCACTGCAAAGAAG	Design primers
920707	CCGCCGACGCCCCGACCACCGACACGCCGACCACGGACGCCCCGA	Design primers
969976	ACGACTCCGGTGACCGAGCCTCCGGTGACCGAGCCTCCGGTGACC	Design primers
970397	ACGGTCAGACGCCGGGCGGTCAGGTGCCGGGCGGTCAGACGGCTG	Design primers
995370	GCCCGTCACCCCGCCGACAGCGCCCGTCCCAGCACCGACAGCGCCCGTCACCGCGCCGACAGCGCCCGTCACCGCGCCGGCAGC	Design primers
1018292	GGTGAGCGCTGTCGGCGTTGAACTGGGCGCTGTCGGCGGTGAGGAGAGCGCTGTCGGCGCTGG	Design primers
1040897	CCACCACCGCCACCTCCATCACCA	Design primers
1072311	ACGGGTCCGGCGCTGAGGGGTCCGGCGCTGATGAGTCCGGCGCAG	Design primers
1091011	CCGCCAAGAAGGCTCCGGCGAAGAAGGCCCCGGCCAAGAAGGCCC	Design primers
1100950	GCGAAGAAGGCAGCGGCCAAGAAAACAGCGGCCAAGAAGACAGCGGCGAAGAAAACAGCC	Design primers
1119844	CGGGGATTACGGCGATGGGGGCTACGGCGATGGGGGCTACGGCGA	Design primers
1127378	CGCCG-CGCCG-CGCAG-CGCCT-CGGCG	Design primers
1139938	TGTCG-GTGCG-GTGCG-GTGCG-GTGCG-GTGCG-GTGCG-GTGCG-GTGCG	Design primers
1140129	GTCGACCATCGGGAGGGGCGGGTTCTCGATCATCGGGAGGGGAGGATTCTCGACCATCGGGGAGGGCGGGTT	Design primers
1150947	CTGCTCGACGATGCC-CCAGTCGACGATGCC-CCAGTCGACGATGCC-CCGGTCGACGATGCC	Design primers
1162216	CCGGCGGTCACGGAATCCAGCGATCACGGAGTCCAGCGGTCACGGAGTCCAGCGGTCACGGAGT	Design primers
1172267	GGCGATGGTGATCGCGATGGCGGT	Design primers
1190526	CCGCCTCGGCCGCCGCCGATACGGCCGCCGCCGATACGGCCGCCGCCGATACGGCCGCCGCCGGTTCGGACGCCG	Design primers
1191205	CGAACCGCACCGCGACGAGTCGCACCACGATGAGTCGCACCGCGA	Design primers
1191407	CATGCCGACGCCGACCATGGCAACGCCCACCCCACCGACGCCGAC	Design primers
1200860	TCGTCGTCGGCGTCGTGGTCGTCG	Design primers
1200999	CGGCTGGGTTCGTGTCACCGGCCGGGTTCGTGTCACCGGTTGAATTCGTGTCAC	Design primers
1204933	AGACCGCAGAGAAGTCGGGCGCAGAGAAGTCGGGCGCAGAGAAGT	Design primers
1221079	TTTCCGTCGACCGTGCGCTCA-AACCCGTCGACCGTGCGCTCA-AACCCGTCGACCGTGCGCCCA-ATTCCGTCGATCGTGCGCTCA	Design primers
1222043	GTGAACGCACGGTCGACGAAAATAAGCGCACGGTCGACGAAAACGAGCGCCCGGTCGACGAAAACGAGCGCCCGGTCGACGAAA	Design primers
1243660	GGACCCCAGGGTCACGGACCGCAGGGTTACGGGCCACAGGGTTAC	Design primers
1246835	GCGCGCTCGATGCAATTCCGAGCGCTGTCGATGCAATTCCGAGCGCTGTCGGGGCAATTCCGAGCGCTGTCGGGGCAATTCCGA	Design primers
1246920	CGCTGTCGGGGCAATTCCGGGCGCTGTCGGGGCAATACGGAGCGCTGTCGGCGCAATTCCGAA	Design primers
1250394	GTGGCCGAGGAGCTCGTCGCGGGGGAGCTCGTCGCGGGGGAGCTC	Design primers
1250440	TCGCAGGGGAATTCG-TCGCAGGGGAATTCG-TCGCAGGGGAATTCG	Design primers
1301413	CCGGCCCTGCCGGTCCTGCCGGCCGTG	Design primers
1304216	TCGCCGAGGCGCAGCCTCCCGTCGTTACCGAGGCGCAGCCTCCCGTCGTGACCGAGGCGCAGCCCACCGTCG	Design primers
1310866	GCCGACCACTACCGAACCGACCACGACCCAGCCGACCACGAACCAGCCGACCACCACCGC	Design primers
1361997	CGAGGCGCCGATGCGCCGCGGCGC	Design primers
1390575	CGGCCAGCAGGGTTACGGTCAACAGGGCTACGGCCAGCAGGGCTACGGTCAGCAGGGCTA	Design primers
1390674	GGGCTACGGCCAGCAGGACTACGGGCAACAGGGCTATGGCCAGCAGGACTACGGGCAGCAGGGATACGGCCAACAGGGCTATGGCCAGGC	Design primers
1393286	GCAGCAGACACCGAC-CCGGCAGACAACGAC-CCGGCAGACAACGAC-CCGGCAGACAACGAC	Design primers
1395867	TCGTCGACCGTGCGCTCTATCCCGTCGACCGTGCGCTCTATCGCGTCGACCGGGCGCTTCATC	Design primers
1403704	CTCATGGAGGTTGTCCTCACCGAGCTTGTCCTCACCGAGGTTGTA	Design primers
1420213	CGGGGCTCCTCGACCATCGGGGGAAAAGGCTCCTCGACCATCGGGGAACCGGGCTCCTCGACCATCGGGGGC	Design primers
1426826	GGCCCCGAGCCCGTCAGTCCCGAGTCCGTCAGCTCCGAGTCCGTC	Design primers
1435868	GGTTCACCCCAATACGGCTCTCCCCAGTACGGGTCACCCCACTAC	Design primers
1442681	GTCGCCGGGGTACTGCTCCCCGGGATACTGCTCGCCCGGATACTG	Design primers
1487521	GATCGGCGAACAGGGGGTCGGCGAACAGGGGGTCGGGGAACTGGG	Design primers
1497451	GCGCCGTTCGACCCTGCCGCCGCTTGACCCTGACGCCGCTTGACCCTG	Design primers
1514305	GCGGTGAACCCAAGA-CCGGTGAACCCAAGA-CCGGAGAGCCCAAGA-CGGGTGAGCCCAAGA-CCGGGGAGCCCAAGA	Design primers
1519183	CCGGACGGGCAGGTTCCGGACGGTCGCGTTTCGGACGGGCAGGTT	Design primers
1553260	GGGGAAGGTCTCGACCATCGGGA-GGGGAAGGTCTCGACCATCGGGA-GGCGATGGTTACGACCATCGGGA	Design primers
1560449	TGCCTGATGTGCCGGTGCCTGATGTGCCGATGCCGGGTATGCCGG	Design primers
1592386	CTTCA-CGGCA-CGGCA-CGGCA-CGGCA-CGGCA	Design primers
1616257	TCGGCTGCGGCTTCGGCATCGGCC	Design primers
1650359	GTCGGGGCCCCAGAGCTATTCGGGGCCCCAGAACTATTCGGGACCCCAGAACTA	Design primers
1651183	GCCTCGCCCTCGCCCTCGCCCTCGGCGTCGGCATCG	Design primers
1695139	CGCCGACGCTGACGTCGACGCCGG	Design primers
1695184	ACGACAGCAGGGGTCACGACACCAGAGCTCACGACAGCAGTGGAC	Design primers
1722884	CGGGCCCCAGTACGGAGCACCCCAGTACGGAGCACCCCAGTACGG	Design primers
1762101	TCGACGTCGACCCCGACGTCGCCG	Design primers
1775218	GCGGTGGGGACACAGCCGTTGGAGACACAGCCGGTGGGGACACAG	Design primers
1780873	AACGCCCCAGTCGGGAACCCCCCAATCAGGAACCCCGCAGTCGGGAACCCCGCAGTCGGG	Design primers
1798863	GTCGTCCCCTTCTATGTCGTCCCCCGCTGTGTCGTCCCCTTCTGC	Design primers
1811174	CGGCCCGGACCGGCTCGGCGCGGTC	Design primers
1825220	ACGCCGACCACCACACCGACGACCACGCCGACGACC	Design primers
1825269	CGACGACGGCGACGACCACCACGA	Design primers
1848816	CCACGCGAATCTGACCACCGCGAATCCGACCACCGCGAATCCGAC	Design primers
1865276	ACCACCACGCCGTCGGCGACCACCCCGTCGACCACCACCCCGACC	Design primers
1869869	GTCGACGGTGAGACGGGCGCAGTCGACGGTGGGGCGGGCGCTGTGGGCGATGAGGCGGGCGCA	Design primers
1869999	CGAGCACGTCACCTGCGCCGAGCACCTCACCTGCTCCTAGTGCGTCACCTGCGCCGAGCACGTCACCGGAGT	Design primers
1882368	GGCTCTGGGTGTCTCGGTCCCGGGTGTCTCGGTCCTGGGTGTGTC	Design primers
1902384	GGGTCTCAGCCTTCGGGACGCTCAGCCTTCGGGACTCTCAACCTTCGG	Design primers
1918923	CGGTGGTCGCGGTGATCGCGGCGGTCG	Design primers
1934841	TCCGCGTCTCCCCAG-TCCGCGTCTCCCCAG-TCCACGTCCACCCAG	Design primers
1975960	CCATGAGACCACTGTGCCGTATGGCGTGAGAACGCTGTGCCGTATGGCATGAGAACGCTGTGCCGTATG	Design primers
1984585	TCCCCGACACCCGAATCCCCGACACCCGCAGCCCCGAGAACCGAA	Design primers
2013486	CGTGGCTGGGCTGGGCTTGGCAGTGCTGGGCTTGGTCGGGCTGGGCTTGGTGGGGCTGGG	Design primers
2036843	AGCGCAACCGCAATCGCAACCGCA	Design primers
2160834	ACCAAGGTCAACGTCAAGGTCAACACCAAGGGCATC	Design primers
2194787	CACCGAATCATCCCGGACGGAGTCCGCGAAATCGTCCCGGACGGAGTCCGCGAAATCGTCCCGGACGGAGTC	Design primers
2228039	CCGAGTCCGATGTGGCCGAGACCGCTGTGGCCGAGACCGCTGTCGCCGACACCGAGGTGG	Design primers
2228105	CCCCCGCCGAAGAGACACCGGCCGAAGACACGCCTACCGAAGAGA	Design primers
2228188	GATGACACTGCAGCG-CCCGACACTGCAGCG-CCCGACACTGCAGCG	Design primers
2228404	GACTCCACGAAGACC-GACTCCACGAAGACC-GAATCGGCGAAGACC	Design primers
2228563	CGTCGC-GGTCGC-GGTCGC-GGTCGC	Design primers
2228745	ATCCGGCAAGAAATCGGGGAAGAAGTCCGGCAAGAA	Design primers
2228983	CGGCGCCGTCGCCGGCGTCGACGC	Design primers
2232205	TTTTCACCGTTGTTCGTCACCGTTGTTTGTCACCGTTGT	Design primers
2241894	GACCGCCACACATCGACCACCACACACCGACCACCACACACC	Design primers
2252215	CCGGCTGTCGCCGACAGCGCTCCCGATGTCGTCGACAGCGCTCCCGACGTCACCGACAGCGCTCCCGCCGACACCGACAGCGCTCCCGCCGACACCGACAGCGCTCCCGCCGACGCCGACAGCGCT	Design primers
2265776	GCGACG-GCGACG-GCGCCG-GGGACG	Design primers
2306315	GCCGGTGAGTGCCGAGACGGTGAGTGCAAAGACGGTGAGCCCCGA	Design primers
2313019	GGTGTCGGCGTCGGTGTCGGTGGC	Design primers
2343119	CGGCAT-CGGCAT-CGGGAT-CGGCGT	Design primers
2354698	CGCCAGATCGGCCCCGACGATAGTCGCCGGATCAGCACCGACGACAGTCGCCGGATCAGCACCGACGATAGTCGCCGGATCAGCACCGACGACAGT	Design primers
2365468	GGGTTCGCGAGAGTCGGGTTGGCGGCAGTCGGGTTCGCGAGAGTCGGGTTGGCGGCAGTCGGGTTCGCGGGGGTC	Design primers
2371935	CGATGACTTCCACGACGACGACCTCCACAACGACGACCTCCACAACGGTGACTTCTACGA	Design primers
2372662	GCCGACGACCCCGACTCCTACCACCCCGACTCCTACGACCCCTAC	Design primers
2388323	GCC-GAC-TCC-GAC-GAC-GAC-GCC-GAC	Design primers
2391903	GGGGGCGGGGCCGCGGGCCGGGGCGGGGGC	Design primers
2399128	CGGATGGGATCGAATCGGATGGGAT	Design primers
2411163	GTCCGCGCTTGTCGA-GTCTGAGTTTGTCGA-GTCTGAGTTTGTCGA-GTCCGAGTTTGTCGA	Design primers
2432643	GTGTCGGGGCTGAATCAGAGTCGGAGGTGAATCAGAGTCGGGGCTGAACCG	Design primers
2432712	AGACGTCGGATCAGCGAGACGCCGGATCAGAGAGACCGCGGATCAGAG	Design primers
2434347	GGTGGCCTTCTTGGCCGCCTTCTTGGCGGTCTTCTT	Design primers
2476460	ACCTGTGGCACTCCTCTGGCACTCCTGTGGCAC	Design primers
2478651	GGCTGACGAGCAGGGCGCCGGCGAGCAGGGAGCCAACGAGCAGGGCGCCGACGAGCAGGG	Design primers
2484642	GCGGACGGTGCTGAGGTCGAGGGTGCTGAGGTCGACGGTGCTGAA	Design primers
2484742	CAGGAACCCAAGACGCAGAAGCCCAGGACGCAGAAGCCCAGGACG	Design primers
2490748	CCGACGACCGCCTCG-CCGACGACCGCCTCG-CCGACGATGGACTCG	Design primers
2499160	GCACTGGTCGAGTCCGCAGTGAACGAGTCCGCAGTGACCGAGTCC	Design primers
2526320	CGGCAGGCCGAACCACAGCAGGCCGAATCACAGCGGACCGAACCA	Design primers
2539113	CCGGCCGATTCCGAGACCCCGGCCCACACCGAGACCCCGGCCCACACCGAGACC	Design primers
2553985	GACCGCAACGGGTCCAGCCGTAACGGGTCCAACCGCAGCGGGACC	Design primers
2556716	GTGCCCACCGTCTTC-CTGCCCACCGTCTTC-CTGCCCACCGATTTC-CTGCCCACCGTCGTA	Design primers
2614731	TGCGGTGTC-GGCGGTGTC-GGCGGTGTC-TGCGGTGTC	Design primers
2615362	TCGTCCGCCCCGATCCCGCCCGCCCCGATCCCGTCTGTCCCGATC	Design primers
2624306	CAGCGCCAGTGCCACCGCCAGTGC	Design primers
2647849	ACCAGCAGCCGGGACTCCAGCAGACAGGACCCCAGCAGCCGGGTC	Design primers
2656708	CCCGTGTCCCTGGCCCCCTTGTCCCTGGCCCCCTTGTCCTTGACCCCACTGCCCCTGGCC	Design primers
2662268	CGACGTCGACCTCGCCGTCGAGGT	Design primers
2675405	CGGTGTCGGCGTCGGTGTCGGTGG	Design primers
2682022	GATTCGACCCCCTCT-GCGACGACCCCCTCT-GCGACGACCCCCTCT-GATTCGACCCCCTCT	Design primers
2690505	CGGGTCAGCTCGGCGTGGGTCAACTCGGTGCAGGTCAGTTCGGCG	Design primers
2720152	GGTGGTCAGGGTTCCGGGGGTGGCCAGGGCTTCGGGGGTGGTCAGGGCTTCGGC	Design primers
2724998	ACGACGACCTCGGGTTCGGCAACCTCGGGTTCGACGACCGCGGGT	Design primers
2726112	GTGACAAACGCCGAGCACGTCGGTGACAAACGCCGCGCACGTCGGTGACAAGCGCCGCGCGCGGCG	Design primers
2736871	GCCGGTATCGCCGGTACCGCGGGTATC	Design primers
2746710	AGTGCGCCGTACGGCGCTGCCGCCCAAGCGCCATACGGCGCTGCCGCCCAAGCGCCGTACGGCGCTGCGGCC	Design primers
2770258	CGGGTGGACCCAGCCCGGGTGGACTCAGTCCTGGTGGCCCCAGTC	Design primers
2799835	CCGCGAAGGGGTTCAGCGCCGAGGGGTTCAGCGCCAAGGGGTTCA	Design primers
2817052	CGGCGTCGGCTTCGGCGACCGCGT	Design primers
2821743	GGTCGCTTCCCGATCCGTCGCCGCCCGATCCGTCGCTGCCCGATC	Design primers
2827944	GGCTACCAGCAACCGGGCCATCAGCAGCCGGGGTACCAACAACCAGGGTTCCAACAACCG	Design primers
2838637	TCCTCGCGGTCGTCGTCGGGGTCGTCACCGCGGTCG	Design primers
2933336	TGTGGTCCCCGTGCC-CCTGGTCCCCGTGCC-CCTGGTCCCCGTGTC	Design primers
2933382	CCGGCCGTCGTGTCCAGGGTCGTCGTGTCCAGGGTCGTCGTGTCC	Design primers
2939657	CGGCGTCGACGTCGGAGTCGGCGG	Design primers
2962370	TCGCATCGTGAGCTGCGGCAACGTGAGCTGCGGCAACGTGAGCTG	Design primers
3067075	GGGAGCGCTGTCGGCGTCGGGCTGGGCGCTGTCGGCGTCGGGCTGAGCGCTGTCGATGTCGGG	Design primers
3067645	GGCGCCGTCGGCGGTATCGGGAGCGCTGTCGGCGGTATCAGGAGCGCTGTCGGCGGTGTCAGG	Design primers
3093303	GTGACGACGGGCGCCGTCGACGTGGTGACGGGCGCTGTCGGCGTCGGGACGGGCGCCGTCGGC	Design primers
3102354	GTCACC-GACACC-GACACC-GACACC	Design primers
3128012	CGGTCTCGGTGTCCGTGT-TGGTCTCGGTGTTCTTGT-TGGTCTCGGTGTTCTTGT-TGGTCTCGGTGTTCTTGT	Design primers
3133079	CCCACCGCTCGCTGCGCTCGGTGCCATCCTGCTCGCTGCGCTCGGTGCCATCCCGCTCGCTGCGCTCGGTGCCATCCTGCTCGCTGCGCTCGGTGCCATCCCGCTCGCTGCGCTCGGTGG	Design primers
3141812	GCCGGACCGGGCCGGAACCGGCCGGTCTGGGGCGGGCCGG	Design primers
3141887	TTCGGGCCAGCAGGGTTCGGACCAGTTGGGTTCGGGCCAGCGGGGTTCGACACAGCAGGG	Design primers
3153368	TGTCGCGGGACCGTC-GTTCGCGGGACCGTC-GTTCGCGGCACCGTC	Design primers
3167722	TCCCCGTCGGATTCCACGCCGTCGGAGTCCGCTCCGTCCGATTCC	Design primers
3168300	GACGTCGGGGACCACGACGTCAGGGACCACGACCTCGACGACCAC	Design primers
3169512	CGTCATTGTACGTAGGTCGTCACTGCACGTTGGTCGTCACTGCACGTCGGTCGTCACTGCACGTCGGT	Design primers
3172794	CGGGCCCGGTGCGCAGCACCGCAG-TGGTTACGGTGCGCAGCACCGCAG-TGGTTACGGTGCGCAGCACCGCAG-TGGTTACGGTGCGCAGCACCGCAG	Design primers
3186050	GAACCAGGGGCCACAGAGCCAGGAGACACAGAGCCGGGAGCCACA	Design primers
3217078	CCCGAG-CCCGAA-CCGGAG-CCGGAG-CCGGAG-CCGGAG-CCCGAG	Design primers
3219900	GTCGCCCCCCGCCTCGTCCGCCCCCGCCTCGTCCGCCCCTGCCTC	Design primers
3232752	TCGGCGACGGCGTCGACGGCGGCG	Design primers
3267507	CGGACGACACCGACTCTGACAGCACCGACTCTGACAGCACCGACTCGGCCGCCACCGACT	Design primers
3269984	GGACCGTCAGCCGGCAACCC-ACCGCGTCAGCCGGCAACCC-ACCGCGTCAGCCGGCAACCC	Design primers
3312381	GGAGGTCGGGCTGGT-GGTTGTCGGACTGGT-GGTTGTCGGACTGGT-GGTTGTCGGACTGGT-GGTTGTCGGACTGGT-GGTTGTCGGACTGGT-GGTTGTCGGACTGGT-GGTTGTCGGACTGGT	Design primers
3317731	TGGTCGTCACGTCGGTGATCATCGCGTCGGTGATCGTCACGGCGC	Design primers
3339189	CTGTCTCGGTGCTGACTGTCTCGGGGCGGCCTGTCTGGGGGCGGA	Design primers
3369667	GTCGTCGTCGAGATGGGGGTCGTCGAGATGGGGGTCGTCGGGATG	Design primers
3384928	CGTCTGTGTCGTACCCCCGTGTGTCGTACCCCCGTGTGTCGTACC	Design primers
3389606	CCTGTCGACCTCGTG-CCGGCCGACGTCGTG-CCGGCCGACCTCGTG-CCGGCCGACCTCGTG-CCGGCCGACGTCGTG	Design primers
3394931	TCGCCGCCGGGACTCGGGCGCATG-ATCCTGCCGGGACTCGGGCGCATG-ATCCTGCCGGGACTCGGGCGCATG-ATCCTGCCGGGACTCGGGCGCATG-ATCCTGCCGGGACTCGGGCGCATG-ATCCTGCCGGGACTCGGGCGCATG	Design primers
3396243	GGTGGTCTTCTTGGCGGGAGCCTTCTTGGCGGCGGTCTTCTTGGC	Design primers
3396398	TCTTGGCCGGGGCCTTCTTGGCGGCGGTCTTCTTGGCGGGAGCCTTCTTTGCCGCGGTCTTCTTGGCCGGGGCCTTCTTCGCCGCGGTCT	Design primers
3428676	GAACCGACGAGCACTGGGCCGACGAGCGCTGGTCCGACGAGCACT	Design primers
3451472	AATGCTCGTGGCCTGTTCGAGCCTCGTGGCCTGTTCGAGCCTCGTGGCCTGTTC	Design primers
3454353	TCTCAGGTCGGTCGG-TCTCAGGTCGGTCGG-TCTGCGGGCGGTCGG	Design primers
3474946	ACTCCGCAAAGAGTGACACCACAGAGAGTGACACCACAGAGAGTG	Design primers
3515527	ACCGTGACGGTGACCGCGACGGTG	Design primers
3522626	GCGGGCTCGCTGCCAGAAGTCGTCTCGCTGCCAGAAGTCGTCTCGCTGCCAGAA	Design primers
3524961	ACGGTGCTTGATCTGGCGGCTCCG-CCGCGGCGTGATCTGGCGGCTCCG-CCGCGGCGTGATCTGGCGGCTCCG-CCGCGGCGTGATCTGGCGGCTCCG-CCGCGGCTTGATCTGGCGGCTCCG	Design primers
3546348	CGCAGACCCCGAGCCCGCAGACACCGAACGAGCAGACACCGACCC	Design primers
3552495	GTCGGTGTTGTCGTTGACGGTGTTGTTGTAATCAGTGTTGTTGTT	Design primers
3565345	GGGCCGGGATGGCCCGGAATGTGCCGGCAT	Design primers
3569586	CGGCATCACCCAACCCGACCTCACCCACCCCGGTGTCACCCGACC	Design primers
3574933	CCA-CCA-CCA-CCC-CCT-CCA-CCA-CCA	Design primers
3582472	TGCCCCGTGCCCGGTTGACGCGTGCCCGGTTGACGAGTGCCCGGT	Design primers
3602040	CAGGGGCTAGACCCGGGCTAGACCGGGGCTAGA	Design primers
3629253	GACCGA-CACCGA-CACCGA-CACCGA	Design primers
3659082	GTGTTGGCCTGCTCCGTGTCAGTCTGCTCCGTGTCGGCCTGCTCC	Design primers
3678765	GTCGTCCTGTTCATTGCGCTCGTCGTGTTCAGTGCGCTCGTCGTGTTCAGTGCG	Design primers
3707125	TATCCCGCTGCGCCA-CAACCCTCTGCGCCA-CAACCCTCTGCGCCA-CAACCCTCTGCGCCA	Design primers
3717656	GCCGGCGCCGCCGCGGGCGCCGCC	Design primers
3745868	CACCGTTGTCTGCAGCACATCTGTCTGCAGCACATCTGTCTGCAG	Design primers
3750705	GTCCTCGGAACCTCGGTCCTCGGAATTTCGGTTGTGGGAACCTCG	Design primers
3785550	ACTGCCCTGCGCCGATCTGCCCTGGGCCAATCTGCCCTGCGCCGG	Design primers
3795225	CGAGGCGGTCGGGGGCTGGCCGGTCGGGGGCTGGGCGGTCGGGGG	Design primers
3795336	CGCGTACGATCCACCGGGCGCTGACGATCCACCCGGCGCGACCGATCCACCGGG	Design primers
3795463	CTCCCC-GTCCCC-GTCCCC-GTCCCC-GTCCCC	Design primers
3804432	TGTCGATGCGCGCGTCGGTGCGCGCGTCGGTGCGCG	Design primers
3814472	CGTCGACATCGACGTCCACGACGA	Design primers
3838186	CGGACACGCCCGCCACCGACACGCCCGCCACTGACACGTCTGCCA	Design primers
3869725	ATACCCCCGGCTCGA-GTACCCCCGGCTCGA-GTAGCTCCGGCTCGA	Design primers
3892570	GACATC-GACACC-GACACC-GACAGC	Design primers
3925085	GCTGGGCCCCCGTCGGGTGCGGCCCCGTCGGGTGCGGCCCCGTCG	Design primers
3943104	GATTCGAGCTCGGTGG-TGGTCGAGCTCGGTGG-TGGTCGAGCTCGGTGG	Design primers
3947613	CTTGCCATGTCATCT-ACTGCCATGTCATCT-ACAGCCATGTCATCT	Design primers
3954576	CGCGCCGCGGCGAGCTGCGCCGCGG	Design primers
4036840	CCGCATCCCGAAACA-CCGCATCCCGAAACA-CCGGACCACGAAACA	Design primers
4052078	TGTCCCCATGCCTGTTGTCCCCGTGCCGGTTGTCCCTGTGCCAGT	Design primers
4076191	TGCGCC-TGCGCC-TGCGGC-TGCGGC	Design primers
4091049	GGCGTCGGCGGCGGCGACGGCGTC	Design primers
4092410	GGTCCCGTTGATCGCCGTGCCGTTGGTCGCAGTGCCGTTGGTCGC	Design primers
4096499	GGCGATGGCGGTGCCGATGGCGAT	Design primers
4121283	CCTGCCGGCCCGGGTACTGCTGCCCCGGGTACTGCTGGCCCGGAT	Design primers
4123311	TGCTGACGCTGGGGCTGCTGCTGACGCTGGGGCTGCGGCTGCTGCTGACGCTGCGGTTGGGGCTGCTGCTGA	Design primers
4132370	CCCGCT-TCCGCT-TCCGCT-TCCGCT	Design primers
4143618	ATTCGCCGGCTCCGCCTCAGCCACATCACCGGCTACGCCTCAGCCACATCACCGGCTTCGCCTCAGCCACATCACCGGCTTCGCCTCAGCCACATCACCGGCTCCGCCTCAGCGA	Design primers
4146203	ATCGTCGTCATCGCCGTCATCGTCGCC	Design primers
4163369	TCGTCGTCTTCGGCGTCGTGGTCG	Design primers
4191323	CGACCGCCGCGAACCCCACCACCGCGAACCCCACCACCGCGGACC	Design primers
4195947	GTCCCTCATCCGCCATTCCTTCATCCCCCATTCCTTCATCCCCCA	Design primers
4199791	CCGAGGCCGCGGGCGAGGTCGAGG	Design primers
4202382	GCTGGTGTTCTCTGGGCCGGTGTTGTCTGGGCTGATGTCTTCTGG	Design primers
4213293	CCGGTCACCCCAGGCCCTGTCACCCCAGACCCCGGCACCCCAGACCCTGTCACCCCAGAC	Design primers
4243812	TTGATCGGTGCTGGATTCCTCGGTGCTGGGTTGATCGGTGCCGGATTCCTCGGTGCTGGGTTGTTCGGTGCTGGA	Design primers
4243901	GTTGATCGGCATCGGGTTGTTCGGCATCGGGTTGTTCGACGTCGG	Design primers
4246780	CGGTCCAGCCCTGTTCTGTCGAGCCCTGATCTGTCGAGCCCCGTT	Design primers
4278741	GGTGTTGGGCGATCCGGTGTTCGGCGACCCGGCGTGCGGCGATCC	Design primers
4282938	CCTCAGATCACGGGCTTCAGATCACGGGCTTCAGATCGCGGG	Design primers
4295286	CGCTGCCTCGGACTCGGCTGCCTCGGGCTCCGCGGACTCGGAGTCCGCCGTCTCGGACTCGACTGCCTCGGACTC	Design primers
4317836	CCCGTTGTCGGTCAG-ATCGTTGTCGGTCAG-ATCGCTGTCGGTCAG-ATCGCTGTCGGTCAG-ATCGCTGTCGGTCAG	Design primers
4320603	GTCGCCTCGTCGCGTCGTTGCCTC	Design primers
4334992	GTGGTCTCATGAAGAGTGGTCTCGTCAAAAGTGGTCTCGTCAAAA	Design primers
4338785	TGACTGTGCTGCCGT-TGATTGGGCCGCCGT-TGATTGGGCCGCCGT-CGACTGGGCCGCCGT-TGATTGGGCCGCCGT	Design primers
4356651	CCTCGCGCCAGTCTTCGCCGAGCCAGTCTTCTCAGCGCCAGTCTT	Design primers
4357488	GCCCTGGCGGCGCGACTGGAGCTGGCGGCGCGACTGGACCTGGCGGCGCGATCG	Design primers
4366516	CCGCCTCCCCGTCCTCCATCTCCCCGTCCTCCATCTCCCCGTACT	Design primers
4368412	CACCGTTCTGTGTCCCATCGCTCTGGGTCCCATCGCTCTGTGTCCCATCGCTCTGTGTCC	Design primers
4369249	CGGCGGCGTCGGCCGCGGCGGAGG	Design primers
4381497	GCATCG-GCATCG-ACATCG-GCATCG-GCATCG	Design primers
4413462	GGTGGCCGCGGCGGCGGCCGCGGGAGTCGCCGCGGC	Design primers
4419258	TGTCGGTCTCGGTGTCGGTGTCCG	Design primers
4439234	GACACC-GAGACC-GACAGC-GACAGC-GACAGC-GACAGC	Design primers
4453783	TCCGGCTTCTGTGCTTCCGGGTTCTGAGTTTCCGGATTCTGGGTT	Design primers
4466016	GACCTCGGGGTCGGCGATCTCAGGGGCGGCGATCTCGGGGACGGT	Design primers
4468751	ACCCCGACCCAGACCCTGCCCCCG	Design primers
4481377	TGCTGT-CGCTGT-CGCTGT-CGCTGT	Design primers
4487860	GCGGCGCGGTGCTGCGCGGAGCGTC	Design primers
4488844	TCACCGGAGCGAACCTGACCGGGGCCAACCTCTCCGGGGCCAACCTCACCGAAGCCAACT	Design primers
4489116	GCC-GAC-GCC-GCC-GCC-GTC-GCC-GCC	Design primers
4491007	GGCGATCGGCCCAGAGGTGATCGGCCCAGGCCTGATCGGCCCAGA	Design primers
4510396	ACCCCGCCCCCAAGAACCCGACGCCCAAGAACCCCAGGCCCAAGA	Design primers
4519622	GGCGGAGGTGGAGGCGGCGGCGGA	Design primers
4536353	ACGGCGACGACGAAGGCGACGTCG	Design primers
4539120	ATCCGAATCCCTCGC-ATCCGAATCCCTCGC-ATCCAAACCCCTCGG	Design primers
4547345	ACGGGGGCACCGGCG-GTTGGGGCACCGGCG-GTTGGGGCACCGGCG	Design primers
4558855	ACGTCGACGTGGGCGTCGAGGTCG	Design primers
4579014	GCTCGTCGCTAACGCGTCGCTAACGCGTCGCTA	Design primers
4598790	ACCACTACCAACGAATCGACCCCTACCTACGAATCGACCCCTATGAACGAATCG	Design primers
4614728	GCTGCTGGTGCTGCTGGTACTGCT	Design primers
4616193	CGATGACGAAGACGGTGAAGATGA	Design primers
4624814	CCCAACGGATCACACTCCACCGGATCACACCCCGCCGAATCACAC	Design primers
4656829	CCGGGTTGGACTGTTGGCCATACGGCTGCGACTGTTGGCCATACGGCTGCGACTGTTGGCCAT	Design primers
4664400	ATCTGAGCCATCGGAATCTGGGGCGTCGGAATCTGGGGCGTCGGAATCTGCGGCATCAGA	Design primers
4686359	TGGCACCAATCGTCTGTCACCAACCGTCTGTCACCAATCGTC	Design primers
4715970	GCGCCGGTCGCGCCGGCCGCGCCCGTC	Design primers
4718387	GCCGTGATCGCCCTGATCGCCGTCATC	Design primers
4719003	CGGCACAGCCGCACAGCGGCACAC	Design primers
4730314	GGTCGAGGTGGTCGACGTGGTCGTGGT	Design primers
4761018	CAACACCACCAGCACCACCGACACCAC	Design primers
4808838	CGATGTCGGGCTGGTCGGTGGTGTCGGGCTGGTCGGTGGTGTCGGGCTGATCGGGGGTGTCGGGCTGATCGG	Design primers
4813706	GACACC-GAGACC-GACAGC-GACAGC-GACAGC	Design primers
4835428	CTCGGGCGTCGCGGT-GTCGGTCGGCGCGGT-GTCGGTCGGCGCGGT-GTCGGTCGGCGCGGT-GTCGGTCGGCGCGGT-GTCGGTCGGCGCGGT	Design primers
4851096	GATCGCCGAGATCGACGAGCTCGCCGA	Design primers
4879359	GAGCGTTTGGGTACCGAGCGCCTGGGTACGGAGCGCCTGGGCACC	Design primers
4888614	GGCAGCAACACCCACCCCATCAACACCCACCGCGTCAACACCCAC	Design primers
4914868	AGCCGCGCCGCGCCGAGGCGGGCCG	Design primers
4921661	TGGGGCGGATAGGACTCGGGCGGATACGACTGCGGTGGATATGACTGGGGCGGATACGGA	Design primers
4937623	CCGACG-CCGACG-CCGGCG-CCGACC	Design primers
4951570	GCACGGACGACGACGGCGCAGATGACGACGGCGCGGACGACGACG	Design primers
4954588	GACGCACTGACTGTTCGGGCACACTGACTGTTCGGGCACACTGACCGTTCG	Design primers
4962207	CGTCGAGTGCGGCGT-CGTCGAGTGCGGCGT-CGTCGAGTGCCGAAT	Design primers
4968555	CCAAATCCCGTCGACCGTGCGCTCATTTCCGTCGACCGTGCGCCACATCTCGTCGACCGTGCG	Design primers
4980506	CGAGACTCCCGCCGACGAGACTGGGGCCGACGAGACTGGGGCCGA	Design primers
4981682	ACACGGTCCTCGTCGACACGGTCCTCGTCATCGCGTTCCTCGTCG	Design primers
5007798	CGGCCAGTTCGGTCAGTTCGGACAGTT	Design primers
5019032	GACACCGAGACCGACAGCGACACCGACAGCGACAGC	Design primers
5102608	CTCGGCGGCACCGGGCTCGGCAACACCCGGCTCGGCAGCACCGGC	Design primers
5156817	TGACCGGTGATCGGTGACCAGTGATCGG	Design primers
5158132	GCCGTCGCTGTCGCCGTTGCCGTC	Design primers
5166001	CGGTGGCGCTGGCGGTGTTGGTGG	Design primers
5169444	CCCCGCAACCGCAGTACCAGCAGCCGCAGTACCAGCAACCCCAGT	Design primers
5183065	GCCGGCGGGACCGATGCCGGTGGGACCCAAGCCGGTTGGGCCGAT	Design primers
5211582	CGATTCCGATCCTCCGGGTCAGCGCTGATCAAGACCCTCCGGGTCAGCGCTGATCAAGACCCTCCGGGTCAGCGC	Design primers
5232412	ACCGGAGCCGGAACCCGAACCCGA	Design primers
5242057	CGGCGGCGGAGGCGGCGGCGGCGT	Design primers
5244922	ACCTCCCCCGATGGTCGAGGCCTCCCCCCGATGGTCGACGCCTTCCCCCGATGGTCGAGG	Design primers
5250806	CCCGATCGACGCGAAACAGCGCCCGATCGATGTAAAACAGCGCCCGATCGACGCAGATGAGCG	Design primers
5299437	GCCGACCTCGCCGACCACCTCGCCGCCGCTCTCGCC	Design primers
5303175	GCACCCGAGTCCACGCCGACCGAGTCCACGCCGACCGAGTCCACG	Design primers
5322781	ATCTGCCGCAGCTTTTTCTGCCGCCGCCTTTTCTGCCGCAGCTTTGTCTGCCGCCGCCTT	Design primers
5350890	CGCCAGCGTCAGCGGCAGCCCCAG	Design primers
5362494	CACTGAGACCACCAGCGCCGTGACCACCAGCACCGAGACCACCAG	Design primers
5395398	GACATC-GACACC-GACACC-GACAGC	Design primers
5441055	GTCCTGTCCCGACCTGTCCCGTTCT	Design primers
5490441	CGTGATGGCGCGTTTCGCGCGGATGTGACAGTGCGTTTCGCGCGGATGTGACAGTGCGTTTCGCGCGGA	Design primers
5495614	CCGCCGCCACCGCCGCAGCTGCCG	Design primers
5502000	CCCGGGCGTCCCCGC-CCTGGATGTCCCCGC-CCTGGATGTCCCCGC-CCTGGATGTCCCCGC-CCTGGATGTCCCCGC	Design primers
5549225	AGCGTCGTCATCAGCGGCTTCGTCATCGGCGGCGTCGGCATCAGC	Design primers
5560593	CGGCGAAGGCGAAGGCGACGACGA	Design primers
5570823	CCGGCACCGACACCGGCACCGGCA	Design primers
5576687	CCACCCAGCGCCCCCTCCCCCAGAGCCCCCTCACCCAGCGCCCAA	Design primers
5585314	AGTTCTGATCCAGTGACGATCTGATCGAGTGACGATCTGATCCAGTGA	Design primers
5587974	TTCGGTCACCG-GGCGGTCACCG-GGCGGTCACCG	Design primers
5600780	GTCGGAGTCCGAGTCGTAGTCGAA	Design primers
5606418	GCGGTGGCGGTTTCGGTGGTGGTG	Design primers
5645231	ACGGGACCGGCGCGCACGGGACAGGAGGGCACGGGACAGGAGGGC	Design primers
5654115	TCCATTGAGCCCGAGTCCGCGGAGCCCGAGTCCGCGGAGCCCGAG	Design primers
5664009	CATTCGGTATCAGGCGGTATCAGGCGGTAT	Design primers
5666554	GTCGCCGTCGTCCTCAGCACCGTCGTCCTCAGCACCGTCGTCCTC	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

5760

ACGCCAGACCCCGAC-GGCCCAGACCCCGAC-GGCCCAGACCCCGAC