Microsatellites /Tandem Repeats database

Genome: Dechlorosoma suillum PS

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
52116GCACCAGCAGGGACACCAGCAGCAGGGGCAGCAACAGCACGGCCADesign primers
122885GGCGCCGGCGGCCAGGGCCGAGGCGGCCAGGGCGGCGGGGGCCAGDesign primers
143713GGAGATT-GGTGCAT-GGTGCAT-GGTGCTT-GGTGCTT-GGTGCTT-GGTGCTT-GGTGCTT-GGTGCTT-GGTGCTT-GGTGCTT-GGTGCTTDesign primers
163503GACGAAATGAAGAAGGATGACATGAAGAAAGACGTGATGATGAAGDesign primers
255654GTCTGAGACCCGGCGCCTGAAACCCGGCGCCTGAAACCCGGCDesign primers
267242GGCCCAGGCCAAGGCCGAGGCCCTDesign primers
379536CCCGGCG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAG-GTCTGAGDesign primers
379705TCTGAGG-TCTGAGG-TCCGAGG-TCTGAGG-TCCGAGG-TCCGAGGDesign primers
382029GGGCCA-GGGCAA-GGGCCT-GGGCCT-GGGCCTDesign primers
393963CGTCGGCGCCATCCTCGGCGCCGTCGCCGGCGGCATDesign primers
427495CGTGGTCGAAACGGTGGTCGAAGCGGTGCTCGAAACDesign primers
435160GGCGGCGGCGGAAGCGGCGGCGGTDesign primers
442400GGTGGTGGTAGTGGTGCTGGCGGTDesign primers
452445GGCCTGGGCCAGGGCCTGGGCGTGDesign primers
456257CGGCGATGAAGGCGGAGACGAAGGCGGCGACGAAGCDesign primers
460689CGGCACCGGCCGGCACCACCCGGCAGCTGCDesign primers
485664TTTCGGCTCTTCCTTTTTCGGCTCCGGCTTTTTCTTCTCTTCCTTDesign primers
569966GGGCAGGGGCGGCGGCAGGTGCAGDesign primers
590038GCCCAGGCCCTGGCCCTGGGCCAGDesign primers
623535GGAGCGGAAGCGGAAGCGGGAGCCDesign primers
651569CGTTGCCGTCGCCGTTGTCGTTGADesign primers
703565GGTGCAGGTGAAGCTGCAGGTGCTDesign primers
807800CCGCCATCGCCACCGCCGCGGCCADesign primers
812730CCAGGGCCCGGGCCTGGGCCAGGTDesign primers
821939ACAGGG-CCAGGG-TCAGGG-TCAGGGDesign primers
833086CCCTGGGCCTGGCCCAGGCCCTGTDesign primers
876126GACCAGGGCCAGGCCCAGAACCAGDesign primers
892345GGATATGGCGGACATGGCGGAAATGGCDesign primers
911804GATGGTGATGGGGATGATGATGGTDesign primers
963701CGAAGGCCGAAGTGAAGGCGGAAGCGAAGGCCGAGGDesign primers
973490CACAGAGGACACAGAGAACACAGAGGGDesign primers
991890CCTGGCCCGGGCCCTGACCCCGGCDesign primers
1012307TGGCGGTGCCGGTGCCGGTGGCCGDesign primers
1024384ACCAGGGCCAGGACCAGCACCTGGDesign primers
1029654GCCGGCGGCGGCGCCGGTGGCGGCDesign primers
1089083CGATAAGAAGGCGGACGAAAAGAAGGGCGACGAGAAAAAGCCGGAGGAAAAGAAGCCGGADesign primers
1089144GAGAAAAAGGCCGAGGACAAGAAAGCCGAGGAGAAGAAGGCCCAGDesign primers
1209012CACAGAGGGCACAGAGAGCACAGAGGGDesign primers
1254382TGGCCC-TGGCCC-AGGCCC-TGGCCGDesign primers
1312358CCTGGCCCTGCCCCTGGCCATGGCDesign primers
1325906GAAGAAGTCCAGGAAGAAGGCCAGGACGAAGACCAGDesign primers
1330438TGGCCCGGGCCCTGGCCCTGGCCGDesign primers
1335038GCTGCTGGTGCTGCTCCTTCTGCTDesign primers
1360904AGGACAAGGACCTGGACAAGGTCADesign primers
1407166CGCACCGGCCGCGCCGGCCGTACCGGCDesign primers
1408019CCGGCGGCACCGGCGGCTTCGGCGGCADesign primers
1455148GCTGGCGCCGGCGCCGGCGGTGGCDesign primers
1456435CGAGGGTGAGGGCGAGGCCCAGGGDesign primers
1596512TTTTTGTTTGCGG-CTTTCGTTTGCGG-CTTTCGTTTGCGG-CTTTCGTTTGCGG-CTTTCGTTTGCGG-CTTTCGTTTGCGG-CTTTCGTTTGCGG-CTTTCGTTTGCGG-CTTTCGTTTGCGG-CTTTCGTTTGCGG-CTTTCGTTTGCGGDesign primers
1637831ATCGGCGGCATCGTCGGCATCGGCGTCDesign primers
1663034GTCGGCCGATGTTGGCCCATGTTGGCAGATDesign primers
1663915GGCCG-GGGCG-GGGCG-GTCCG-GGGCGDesign primers
1689902GCCGCCGCCTCCGCCGCGGCCGTCDesign primers
1699999CTGGCCGTGGCCCAGGCCCTGGACDesign primers
1700798CCTTTCCTCAC-ACTTTCCTCAC-ACTTCCCTCACDesign primers
1702726GGCCCTGCTGCTGGCCCTGCTGGCGGTACTGCTGCTDesign primers
1748273CACAGAGGGCACAGAGGTCACCGAGGGDesign primers
1759408CAGGGCCACGGCCAGGGCCAGGGGDesign primers
1780334GATGGCGGTGGCGACGGCGAGGGCDesign primers
1921582CCCGC-CCCGC-CCGGC-ACCGC-CCTGCDesign primers
1957811AGAGAAGACAAGAAAAGAGCAGAGGDesign primers
1970906GGCGATGACGATGACGATGGAGATDesign primers
1971901CTCGGC-CTTGGC-CTTGGC-TTCGGCDesign primers
1977681TGGGGAGTGCTACGGAGTGCTACGGAGTGCDesign primers
1981237CCTGGC-CCTGGC-CCAGGC-CCTGGC-CGTGGCDesign primers
2095345GATGGCGTTGGCGATGGGGATGGADesign primers
2147457GGCAACGCATCAGGCAAGGAATCAGGCAAAGAATCADesign primers
2158090CTCTGTGCCCTCTGTGTCCTCTGTGGCDesign primers
2171827AGC-AGC-AGC-ACC-AGC-AGC-ACC-AGCDesign primers
2185355TTCTCTGTGCTCTCTGTGTCCTCTGTGDesign primers
2192361CGGGCAGGGAAGGGGGAAGGGAAGGGGGAAGGGAAGDesign primers
2213205TGGCGGCG-AGGCGGCG-AGGCGGCG-AGGCGGCG-AGGCGGCGDesign primers
2213260TGAGGCAGAAAGCGGTGATGCAGGAGGCGGTGATGCAGGAGGCGGDesign primers
2272893AGGGAGAATTT-GGGGCGGATTT-GGGGCGGATTT-GGGGCGGATTT-GGGGCGGATTT-GGGGCAGATTTDesign primers
2272960GGGCAGATTCG-GGGCAGATTCG-GGGCAGATTCG-GGGCAGATTCG-GGGCAGATTCGDesign primers
2289658CGGCCGGAGGACCTGACGGAGGACCTGACGGAGGACDesign primers
2313746CCATGGCCAAGGCCCTGGCCCTGGDesign primers
2318541AGCAGCAGGA-GGTGGCGGGA-GGTGGCGGGA-GGTGGCGGGA-GGTGGCGGGA-GGTGGCGGGADesign primers
2380107AGTGGG-AGTGGG-AGTGGG-AGTGGG-AGTGGG-AGTGGADesign primers
2391828CCCGGGCCAGGGCCCGGTCCTGGGDesign primers
2416411CAGGCG-CAGGCG-CGGGCG-CAGGTGDesign primers
2467853CCTGGCCGTGGCCCGGGCCCTGGCDesign primers
2472254CCGATGCAGATGCCGGTGCCGATGDesign primers
2474702ATGGGTTGAGAAG-CGGGGTTGAGAAG-CGGGGTTGAGAAGDesign primers
2474742GGGCTGAGGAGC-GGGCTGAGGAGC-GGGCTGAGGAGCDesign primers
2596543GCGACGACC-GCGACGACC-GCGACCACCDesign primers
2616059GCTTCGGCTTCCGCTGCGGCTTCCDesign primers
2636436AGGCCC-AGGCCC-AGGGCC-TGGCCCDesign primers
2746878GAGGGGAGCGGAGGGGAAGGGCGGGDesign primers
2878458CACGGGTTCGGGCACAGGCTCGGGTGCGGGTTCGGGDesign primers
2939843GCCCTGGGCCTGGCCCCGGGCCTGDesign primers
2940946CTCTCTGTGATCTCTGTGCCCTCTGTGDesign primers
2955473TCGGCC-ACGGCC-TCGGCC-TGGGCCDesign primers
2958001CTGGCCCTGCCGCCGGCCCTGCTGCTGGCCCTGCTGDesign primers
2967111CGCCGGGCCGCGCCTGGCCGCCCCGDesign primers
2968244GCGGCAGCGTCATCGGCAGCGCCADesign primers
2969461GGCGGCGTCGGCGGCAGCGGCAGCDesign primers
2984525GGATGCTGATGCGGATGAGGATGTDesign primers
2985093CCAGGG-CCAGGG-CCCGGG-CCAGGGDesign primers
2990756GCGTCACCCCGCATCATCCCGCCTCACCCGDesign primers
3000535GCTGCTGATGCTGCTGCCCCTGCTDesign primers
3019488AGTGCGAAGAGTGCGAGGAGTGGGAAGDesign primers
3073838GGCAAAGCTGGGG-GCGAAAGCTGGGG-GCGAAAGCTGGGG-GCGAAAGCTGGGG-GCGAAAGCTGGGG-GCGAAAGCTGGGG-GCGAAAGCTGGGGDesign primers
3088857GGGCCTTGGCCTGGTCCTGGGCGTDesign primers
3149178TGGCCC-TGGCCC-GGGCCC-TGGCCCDesign primers
3166344GCCGGCCTGGCCGGCGTGGCCGCCCTGDesign primers
3240125TTCCACCAG-TTCCACCAG-TTCCAGCAGDesign primers
3318549CAGGGCCAGGGGCAGCGCCAGGCCDesign primers
3319128GG-AG-CC-GG-GG-AA-CC-GG-GG-AG-CG-GGDesign primers
3339099GGCGCCACGGCGGCACGGCGCCCCDesign primers
3403657CTGGCCCTGCCCCTGGCGCTGGCCDesign primers
3425391CTCTGTGTCCTCTGTGCCCTCTGTGGCDesign primers
3430445GCCGCCGGGGCTGCCTCAGGGGCTGCCTCAGGGGCTDesign primers
3458840GCCGGCCTGGCCGCCCTGCCCGGCCTGDesign primers
3461040CCTCGGCCTCGACCTTGGCCTCGTDesign primers
3562898CTCTCTGTGTTCTCTGTGCCCTCTGTGDesign primers
3586636CCTGGC-CCAGGC-CCAGGC-GCTGGCDesign primers
3662054GCCGCCGGGGCCCATACCGCCCCCGCCCGGACCCATGCCGCCACCGCCGGGCCCCATCCCACCGCCACCGGGACCCATGCCACCDesign primers
3695400CGGCGGCGGCCTGCTCGGCGGCGCCGTTCTCGGCGGCCGCCGACTDesign primers
3713572CTGGCCCAGGCCCGGGCCCTGGGCDesign primers
3713958CGGCCACGGGCACGCCCACAGCCADesign primers
3726493CCTGGCCCTGCCCCTGGGCCTGGTDesign primers
3748422CTGGTG-CTGGTG-CTGATG-CTGGCGDesign primers

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