This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 143718 | TTGGTGC-ATGGTGC-ATGGTGC-TTGGTGC-TTGGTGC-TTGGTGC-TTGGTGC-TTGGTGC-TTGGTGC-TTGGTGC-TTGGTGC-TTGGTGC | Design primers |
| 255656 | CTGAGACCCGGCGCCTGAAACCCGGCGCCTGAAACCCGGCGC | Design primers |
| 379538 | CGGCGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT-CTGAGGT | Design primers |
| 427496 | GTGGTCGAAACGGTGGTCGAAGCGGTGCTCGAAACG | Design primers |
| 1168074 | GGTCGGGCAAAGGATCGGGCAAAGGATCGGGCAAAG | Design primers |
| 1596513 | TTTTGTTTGCGGC-TTTCGTTTGCGGC-TTTCGTTTGCGGC-TTTCGTTTGCGGC-TTTCGTTTGCGGC-TTTCGTTTGCGGC-TTTCGTTTGCGGC-TTTCGTTTGCGGC-TTTCGTTTGCGGC-TTTCGTTTGCGGC-TTTCGTTTGCGGC | Design primers |
| 1977683 | GGGAGTGCTA-CGGAGTGCTA-CGGAGTGCTA | Design primers |
| 2192362 | GGGCAGGGAAGGGGGAAGGGAAGGGGGAAGGGAAGG | Design primers |
| 2213206 | GGCGGCGA-GGCGGCGA-GGCGGCGA-GGCGGCGA | Design primers |
| 2213269 | AAGCGGTGATGCAGGAGGCGGTGATGCAGGAGGCGGTGATGCAGG | Design primers |
| 2272898 | GAATTTGGGGC-GGATTTGGGGC-GGATTTGGGGC-GGATTTGGGGC-GGATTTGGGGC | Design primers |
| 2272954 | GATTTGGGGCA-GATTCGGGGCA-GATTCGGGGCA-GATTCGGGGCA-GATTCGGGGCA | Design primers |
| 2289660 | GCCGGAGGACCTGACGGAGGACCTGACGGAGGACCT | Design primers |
| 2318544 | AGCAGGAGGT-GGCGGGAGGT-GGCGGGAGGT-GGCGGGAGGT-GGCGGGAGGT-GGCGGGAGGT | Design primers |
| 2380104 | GGAAGT-GGGAGT-GGGAGT-GGGAGT-GGGAGT-GGGAGT | Design primers |
| 2474703 | TGGGTTGAGAAGC-GGGGTTGAGAAGC-GGGGTTGAGAAGC | Design primers |
| 2474743 | GGCTGAGGAGCG-GGCTGAGGAGCG-GGCTGAGGAGCG | Design primers |
| 3073840 | CAAAGCTGGGGGC-GAAAGCTGGGGGC-GAAAGCTGGGGGC-GAAAGCTGGGGGC-GAAAGCTGGGGGC-GAAAGCTGGGGGC-GAAAGCTGGGGGC | Design primers |
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