Microsatellites /Tandem Repeats database

Genome: Rickettsia heilongjiangensis 054

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
111373CGGTTGTTGAATCAGATTGCT-CTGACTTTGAATCAGATTGCT-CTGACTTTGAATCAGATTGCT-CTGACTTTGAATCAGATTGCT-CTGACTTTGAATCAGATTGCT-CTGACTTTGAATCAGATTGCTDesign primers
111500TGACTTTGAATCAGATTGCCCTGACTTTGAATCAGATTGCTCTGACTTTGAATCAGATTGCCCTGACTTTGAATCAGATTGCTCDesign primers
356649AGAAGAGATGATAAGAGACGACAAGDesign primers
493094GAAACAATAGAATCAATAGAATCAATADesign primers
498853TTTTTTTCTTTTCTTTTTGTTTTATDesign primers
656724AA-AA-GA-AA-TA-GA-AG-AA-GA-AA-AA-GA-TA-AA-GADesign primers
730756ATTATAACCAATTATTGCCAATTATAAAAADesign primers
737785AATTTTAATTTAAATATTAATTTADesign primers
766037TTAAAGAAGCAAATCTAAAACAAGCGAATCTAAAAGCAGCAAATCDesign primers
786859TTAATTATAATTAACTATTATTAATAATAADesign primers
826581TTTATTTGATTTTGTTTTACTTGATDesign primers
864487AGGCGG-TGGCGG-AGGTGG-AGGTGG-AGGTGGDesign primers
864583AGGCGG-AGGTGG-AGGTGG-AGGTGGDesign primers
864628AGGCGGTGGCGGAGGTGGAGGTGGDesign primers
933324TTTAAGTATTTTAAGTAATTTAATTATDesign primers
1008026ATATTATTTTATATATTATTTTATTDesign primers
1136370ATATTTAAAATATTTAGAATATATAAADesign primers
1144890ATTGCTTCGTCAATTACTTCGTAATTTGCTTCGCCADesign primers
1199328TGTATTAGACTTTATATGAGACTTTATATGAGACTTDesign primers
1233015TTATAGAATTTTAGAATTATAGAADesign primers

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