Microsatellites /Tandem Repeats database

Genome: Cupriavidus necator N-1

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
377462CCACGCCAGGCACCGCGCCAGGCACCACGCCAGGAADesign primers
406269TGTTGCC-CGTTGCC-CGTTGCC-CGTTGCC-CGTTGCC-CGTTGCC-CGTTGCC-CGTTGCCDesign primers
723398GGGCGGCAT-GGGCGGCAT-GGGCGGCATDesign primers
1627417GCACCG-GCACCG-GCACCG-GCACCGDesign primers
1628044CCAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCC-GAAGCCDesign primers
1628427CCCGGAAGT-CCCGGAAGT-CCCGGAAGTDesign primers
1628575GTGCCG-GTGCCG-GTGCCG-GTGCCGDesign primers
1637628GCGGGCGCG-GCGGGCGCG-GCGGGCGCGDesign primers
1764477CGGCAT-CGGCAT-CGGCAT-CGGCATDesign primers
2067675GCGGAG-CCGGAG-CCGGAG-CCGGAG-CCGGAG-CCGGAGDesign primers
2619664ATGCTGCT-GTGCTGCT-GTGCTGCT-GTGCTGCT-GTGCTGCT-GTGCTGCTDesign primers
3255582GTTCCGTGCAGTTCCATGCAGTTCCGCGCADesign primers
3460758TAGCGCCCGATAGTGCCCGATAGCGCCCGATAGCGCCCGCDesign primers
3511356CGCGGGCGT-AGCGGGCGT-AGCGGGCGT-AGCGGGCGT-AGCGGGCGT-AGCGGGCGTDesign primers
3633610CTGCTGCGA-CTGCTGCGA-CTGCTGCGA-CTGCTGCGADesign primers
3740516AACCAAAA-AACCAAAA-AACCAAAADesign primers
3807246GGCGGCGGT-GGCGGCGGT-GGCGGCGGTDesign primers

Please help us improve this resource by reporting problems, suggestions etc.