Microsatellites /Tandem Repeats database

Genome: Cupriavidus necator N-1

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
406270GTTGCCC-GTTGCCC-GTTGCCC-GTTGCCC-GTTGCCC-GTTGCCC-GTTGCCC-GTTGCCCDesign primers
723398GGGCGGCAT-GGGCGGCAT-GGGCGGCATDesign primers
1627417GCACCG-GCACCG-GCACCG-GCACCGDesign primers
1628046AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGADesign primers
1628427CCCGGAAGT-CCCGGAAGT-CCCGGAAGTDesign primers
1628575GTGCCG-GTGCCG-GTGCCG-GTGCCGDesign primers
1637628GCGGGCGCG-GCGGGCGCG-GCGGGCGCGDesign primers
1764477CGGCAT-CGGCAT-CGGCAT-CGGCATDesign primers
2067676CGGAGC-CGGAGC-CGGAGC-CGGAGC-CGGAGC-CGGAGCDesign primers
2619665TGCTGCTG-TGCTGCTG-TGCTGCTG-TGCTGCTG-TGCTGCTG-TGCTGCTGDesign primers
3511357GCGGGCGTA-GCGGGCGTA-GCGGGCGTA-GCGGGCGTA-GCGGGCGTA-GCGGGCGTADesign primers
3633610CTGCTGCGA-CTGCTGCGA-CTGCTGCGA-CTGCTGCGADesign primers
3740516AACCAAAA-AACCAAAA-AACCAAAADesign primers
3807246GGCGGCGGT-GGCGGCGGT-GGCGGCGGTDesign primers

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