Microsatellites /Tandem Repeats database

Genome: Marinomonas posidonica IVIA-Po-181

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
90433TTTTTTAATT-TTTTTAAGTT-TTTTTAAGTT-TTTTTAAGTTDesign primers
183671ATCTTC-ATCACG-ATCACG-ATCACG-ATCACG-ATCACG-ATCACG-ATCACG-ATCACGDesign primers
183726TCACGG-TCACGG-TCACGG-TCACGG-TCACGG-TCACGG-TCACGG-TCACGGDesign primers
364117TGCAGCTTTTGTGCGACTTTTGTGCGGTTTTTGDesign primers
518904AGTAGC-TGTAGC-TGTAGC-TGTAGCDesign primers
539083TTTTTTGTTTTTTTTTGTTCTTTTDesign primers
609199AAAATTTAATTTATTTTACAT-TGTATCTAATTTATTTTACAT-TGTATCTAATTTATTTTACAT-TGTATCTAATTTATTTTACATDesign primers
622112CTAGTGTTGTTGGACCTAGTCTTTTTGAACCGAGTATTGTTGAACDesign primers
635456GTGTTTTA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCA-GCTTTCCADesign primers
712146GATGCT-GGTGCT-GGTGCT-GGTGCTDesign primers
714473GAAGATCGTGAAGATCTTGAAGATCGCDesign primers
796907GTTGAA-ATTGAA-ATTGAA-ATTGAADesign primers
921158GTCGAG-CCAGAG-CCAGAG-CCAGAG-CCAGAG-CCAGAG-CCAGAG-CCAGAG-CCAGAGDesign primers
1047955GCATGACGTTAGCCATGACGTTGGGCATGACGGTCGDesign primers
1203457CTTTTATTTATGAAGGCATAGTATTTATGAAGGCATAGTATTTATGAAGGCDesign primers
1301948GGGCTGTTT-GGTCTGTTT-GGTCTGTTT-GGTCTGTTTDesign primers
1377155GGAAAGTGTCTAAAAGGGAAATCTCTAAAAAGGAAGTGTTTAAAADesign primers
1417856ATTGCC-TGTATC-TGTATC-TGTATC-TGTATC-TGTATC-TGTATC-TGTATC-TGTATC-TGTATC-TGTATC-TGTATC-TGTATC-TGTATC-TGTATC-TGTATCDesign primers
1459474TTGTGATCTCAAAA-GTGTGATCTCAAAA-GTGTGATCTTAAAADesign primers
1486211GTATTTGTAACTAGCTATTTGTTACTAGCTATTTGTAACTAGCTATTTGTAACTAGDesign primers
1486268TATTTGTTGCTAGC-TATTTGTTGCTAGC-TATTTGTTGCTAGC-TATTTGTTGCTAGC-TATTTGTTGCTAGC-TATTTGTTGCTAAGDesign primers
1519622TTAGGGCTT-TTAGGGCTT-TTAGGGTTTDesign primers
1658806TTTGTTGCTCATA-GATGTTGCTCATA-GATGTTGCTCATADesign primers
1667067TAAAAAATA-AAGCAAATA-AAGCAAATA-AAGCAAATA-AAGCAAATA-AAGCAAATADesign primers
1677322TTTTGGCCAAGTAGCTTGTTTCGGCCATGTGGCTTGTTTTGGCCAAGTGGCTTGTTTTGGCCAAGTGGCTAGDesign primers
1677440GTGGCTAGTTTTGGCCAAGTAGCTAGTTTTGGCCAAGTAGCTTGTTTCGGCCAAGTAGCTTGTTTCGGCCAAGTGGCTTGTTTTGGCCAAGAGGCTTGTTTTGGCCAAGTGGCTAGTTTCGGCCAAGTAGCTAGTTTCGGCCAAGAGGCTAGTTTTGGCCATDesign primers
1715044CATGGGTGGCATGGGCGGCATGGGTGGCATGGGCGGDesign primers
1817113CGAGAACGACGAGAGCGACGAGAGCGADesign primers
1822808TATTGCTCGTATTGCTCTTTTTGCTCGDesign primers
1952558GACATCGAATA-ACCATCGAATA-ACCATCGAATADesign primers
2452508TTTTCATGCTCATGACTGTCTTTATGCTCATGGCTGTCTTTATGCTCATGGCTGTCTTCATGCTCATGGCGGDesign primers
2478740CCAGCAAA-CCAGCAAA-CCAGAAAADesign primers
2782498ACTATAAAAACTAAAAAAACTAAAAAADesign primers
2800783ATTCGTTTAACAGACGATCATTTAACAGACGATCATTTAACAGACDesign primers
3092643GTTCAAG-CCTCAAG-CCTCAAG-CCTCAAG-CCTCAAG-CCTCAAGDesign primers
3115305TATTTAAAC-CATTTAAAC-CATTTAAACDesign primers
3249200ATCTAAAGCAAAAAAGCTAATGCAAAAAAGCTAAAGCAATAADesign primers
3249243GCAAAA-GCAAAA-GCAAAA-GCAAAADesign primers
3481147CAACGCACTT-CTACGCTCTT-CTACGCTCTT-CTACGCTCTTDesign primers
3503886CAGGTTTTGGCTCTGGTTTTGGTTCTGGTTTTGGCTCTGGTTTTGGCTDesign primers
3503939TCTGGT-TTTGGT-TTTGGT-TTTGGTDesign primers
3504011TTTGGCTCAACAATCGGTTCGGGCTCAACGATCGGTTCGGGCTCAATAATCGGTDesign primers
3697113CAGCAGCAACAGCAGCTGCCGCAGDesign primers
3788391TTACTTATCGAACCTTTACTTATTGATTCTTTACTTATCAAACAADesign primers

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