Microsatellites /Tandem Repeats database

Genome: Marinomonas posidonica IVIA-Po-181

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
90439AATTTTTTTAAGTTTTTTTAAGTTTTTTTADesign primers
183676CATCAC-GATCAC-GATCAC-GATCAC-GATCAC-GATCAC-GATCAC-GATCACDesign primers
183725ATCACG-GTCACG-GTCACG-GTCACG-GTCACG-GTCACG-GTCACG-GTCACGDesign primers
518905GTAGCT-GTAGCT-GTAGCT-GTAGCTDesign primers
609201AATTTAATTTATTTTACATTG-TATCTAATTTATTTTACATTG-TATCTAATTTATTTTACATTG-TATCTAATTTATTTTACATTGDesign primers
635459TTTTAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCT-TTCCAGCTDesign primers
796908TTGAAA-TTGAAA-TTGAAA-TTGAAADesign primers
921160CGAGCC-AGAGCC-AGAGCC-AGAGCC-AGAGCC-AGAGCC-AGAGCC-AGAGCC-AGAGCC-AGAGCCDesign primers
1301951CTGTTTGGT-CTGTTTGGT-CTGTTTGGTDesign primers
1417858TGCCTG-TATCTG-TATCTG-TATCTG-TATCTG-TATCTG-TATCTG-TATCTG-TATCTG-TATCTG-TATCTG-TATCTG-TATCTG-TATCTG-TATCTG-TATCTGDesign primers
1459475TGTGATCTCAAAAG-TGTGATCTCAAAAG-TGTGATCTTAAAAGDesign primers
1486212TATTTGTAACTAGCTATTTGTTACTAGCTATTTGTAACTAGCTATTTGTAACTAGCDesign primers
1486269ATTTGTTGCTAGCT-ATTTGTTGCTAGCT-ATTTGTTGCTAGCT-ATTTGTTGCTAGCT-ATTTGTTGCTAGCTDesign primers
1658807TTGTTGCTCATAG-ATGTTGCTCATAG-ATGTTGCTCATAGDesign primers
1667070AAAATAAAG-CAAATAAAG-CAAATAAAG-CAAATAAAG-CAAATAAAG-CAAATAAAGDesign primers
1952559ACATCGAATAA-CCATCGAATAA-CCATCGAATAADesign primers
2452523CTGTCTTTATGCTCATGG-CTGTCTTTATGCTCATGG-CTGTCTTCATGCTCATGGDesign primers
3092644TTCAAGC-CTCAAGC-CTCAAGC-CTCAAGC-CTCAAGC-CTCAAGCDesign primers
3115306ATTTAAACC-ATTTAAACC-ATTTAAACCDesign primers
3249202CTAAAGCAAAAAAGCTAATGCAAAAAAGCTAAAGCAATAAAGDesign primers
3481149ACGCACTTCT-ACGCTCTTCT-ACGCTCTTCT-ACGCTCTTCTDesign primers
3503888GGTTTTGGCTCTGGTTTTGGTTCTGGTTTTGGCTCTGGTTTTGGCTCTDesign primers
3503941TGGTTT-TGGTTT-TGGTTT-TGGTTTDesign primers

Please help us improve this resource by reporting problems, suggestions etc.