This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 90441 | TTTTTTTAAG-TTTTTTTAAG-TTTTTTTAAG | Design primers |
| 183677 | ATCACG-ATCACG-ATCACG-ATCACG-ATCACG-ATCACG-ATCACG-ATCACG-ATCACG | Design primers |
| 183732 | TCACGG-TCACGG-TCACGG-TCACGG-TCACGG-TCACGG-TCACGG | Design primers |
| 518905 | GTAGCT-GTAGCT-GTAGCT-GTAGCT | Design primers |
| 609205 | TAATTTATTTTACATTGTATC-TAATTTATTTTACATTGTATC-TAATTTATTTTACATTGTATC | Design primers |
| 635463 | AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC-AGCTTTCC | Design primers |
| 796908 | TTGAAA-TTGAAA-TTGAAA-TTGAAA | Design primers |
| 921161 | GAGCCA-GAGCCA-GAGCCA-GAGCCA-GAGCCA-GAGCCA-GAGCCA-GAGCCA-GAGCCA | Design primers |
| 1301951 | CTGTTTGGT-CTGTTTGGT-CTGTTTGGT | Design primers |
| 1417861 | CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT-CTGTAT | Design primers |
| 1486263 | CTAGCTATTTGTTG-CTAGCTATTTGTTG-CTAGCTATTTGTTG-CTAGCTATTTGTTG-CTAGCTATTTGTTG-CTAGCTATTTGTTG | Design primers |
| 1658808 | TGTTGCTCATAGA-TGTTGCTCATAGA-TGTTGCTCATAGA | Design primers |
| 1667071 | AAATAAAGC-AAATAAAGC-AAATAAAGC-AAATAAAGC-AAATAAAGC-AAATAAAGC | Design primers |
| 3092645 | TCAAGCC-TCAAGCC-TCAAGCC-TCAAGCC-TCAAGCC | Design primers |
| 3115306 | ATTTAAACC-ATTTAAACC-ATTTAAACC | Design primers |
| 3249240 | AAAGCA-AAAGCA-AAAGCA-AAAGCA | Design primers |
| 3481154 | CTTCTACGCT-CTTCTACGCT-CTTCTACGCT | Design primers |
| 3503941 | TGGTTT-TGGTTT-TGGTTT-TGGTTT | Design primers |
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