This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 239877 | GACAATA-GGCAATA-GGCAATA-GGCAATA-GGCAATA-GGCAATA-GGCAATA-GGCAATA | Design primers |
| 251155 | CTGATTTTCTGT-TTGATTTTCTGT-TTGATTTTCTGT | Design primers |
| 468250 | AACAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC-ACAAGC | Design primers |
| 609110 | RCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT | Design primers |
| 659891 | TCACGA-CCACGA-CCACGA-CCACGA-CCACGA-CCACGA-CCACGA-CCACGA-CCACGA-CCACGA | Design primers |
| 682404 | TAGAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG-TCAAG | Design primers |
| 692279 | TCGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT | Design primers |
| 742782 | TAAACCTAAACTTTAAAACCGT-TAAACCAAAAATTTAAAACCGT-TAAACCAAAAATTTAAAACCGT-TAAACCAAAAATTTAAAACCGT-TAAACCAAAAATTTAAAACCGT-TAAACCAAAAATTTAAAACCGT | Design primers |
| 837686 | AAA-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG | Design primers |
| 952755 | TCGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT | Design primers |
| 1114530 | AAA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA-GTA | Design primers |
| 1138500 | GTGCTTT-TGGCTTT-TGGCTTT-TGGCTTT-TGGCTTT-TGGCTTT-TGGCTTT-TGGCTTT-TGGCTTT | Design primers |
| 1149699 | TCGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT | Design primers |
| 1199164 | TCGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT-TTGCTT | Design primers |
| 1263391 | ACTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT | Design primers |
| 1286478 | ATTGAG-CCTGAG-CCTGAG-CCTGAG-CCTGAG-CCTGAG-CCTGAG-CCTGAG-CCTGAG-CCTGAG-CCTGAG-CCTGAG | Design primers |
| 1306384 | TTTTCTCACTTAACTTCGTAG-GTTTCTCACTTAACTTCGTAG-GTTTCTCACTTAACTCCGTAG-GTTTCTCACTTAACTCCGTAG-GTTTCTCACTTAACTCCGTAG | Design primers |
| 1403280 | TGACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA | Design primers |
| 1419272 | TGACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA-GCACA | Design primers |
| 1425452 | AAATAAA-AAATAAA-AAATAAA-AAATAAA | Design primers |
| 1455445 | CCT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT | Design primers |
| 1462625 | TTTGTTCAA-TTTGTTCAA-TTTGTTCAA | Design primers |
| 1535341 | CCT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT-ACT | Design primers |
| 1552011 | GATGGCGGC-GATGGCGGC-GATGGCGGC | Design primers |
| 1560513 | CCGGACGTG-CCGGACGTG-CCGGACGTG | Design primers |
| 1681836 | AACCAATCAGCGGGG-TACCAATCAGCGGGG-TACCAATCAGCGGGG | Design primers |
| 1778363 | ATTGT-TTTGT-TTTGT-TTTGT-TTTGT-TTTGT | Design primers |
| 2031152 | AGCAGTAAA-AGCAGTAAA-AGCAGTAAA | Design primers |
| 2596178 | TTACA-AAACA-AAACA-AAACA-AAACA-AAACA-AAACA-AAACA-AAACA-AAACA-AAACA-AAACA | Design primers |
| 2682073 | GCAAGAGCCAAAACCAACAGCAGAGCAAGAGCCAAAGCCAACAGCAGGGCAAGAGTCAAAGCCAACAGCAGA | Design primers |
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