This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 239879 | CAATAGG-CAATAGG-CAATAGG-CAATAGG-CAATAGG-CAATAGG-CAATAGG-CAATAGG | Design primers |
| 251156 | TGATTTTCTGTT-TGATTTTCTGTT-TGATTTTCTGTT | Design primers |
| 468253 | AGCACA-AGCACA-AGCACA-AGCACA-AGCACA-AGCACA-AGCACA-AGCACA-AGCACA-AGCACA-AGCACA-AGCACA-AGCACA-AGCACA-AGCACA-AGCACA | Design primers |
| 609111 | CTTTTG-CTTTTG-CTTTTG-CTTTTG-CTTTTG-CTTTTG-CTTTTG-CTTTTG-CTTTTG | Design primers |
| 659892 | CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC | Design primers |
| 682407 | AGTCA-AGTCA-AGTCA-AGTCA-AGTCA-AGTCA-AGTCA-AGTCA-AGTCA-AGTCA-AGTCA-AGTCA | Design primers |
| 692281 | GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT | Design primers |
| 742793 | TTTAAAACCGTTAAACCAAAAA-TTTAAAACCGTTAAACCAAAAA-TTTAAAACCGTTAAACCAAAAA-TTTAAAACCGTTAAACCAAAAA-TTTAAAACCGTTAAACCAAAAA-TTTAAAACCGTTAAACCAAAAA | Design primers |
| 837689 | TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG | Design primers |
| 952757 | GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT | Design primers |
| 1114532 | AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT-AGT | Design primers |
| 1138502 | GCTTTTG-GCTTTTG-GCTTTTG-GCTTTTG-GCTTTTG-GCTTTTG-GCTTTTG-GCTTTTG-GCTTTTG | Design primers |
| 1149701 | GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT | Design primers |
| 1199166 | GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT-GCTTTT | Design primers |
| 1263392 | CTTTTG-CTTTTG-CTTTTG-CTTTTG-CTTTTG-CTTTTG-CTTTTG-CTTTTG-CTTTTG | Design primers |
| 1286480 | TGAGCC-TGAGCC-TGAGCC-TGAGCC-TGAGCC-TGAGCC-TGAGCC-TGAGCC-TGAGCC-TGAGCC-TGAGCC-TGAGCC-TGAGCC-TGAGCC | Design primers |
| 1306421 | CGTAGGTTTCTCACTTAACTC-CGTAGGTTTCTCACTTAACTC-CGTAGGTTTCTCACTTAACTC | Design primers |
| 1403282 | ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC | Design primers |
| 1419274 | ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC-ACAGC | Design primers |
| 1425452 | AAATAAA-AAATAAA-AAATAAA-AAATAAA | Design primers |
| 1455446 | CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA | Design primers |
| 1462625 | TTTGTTCAA-TTTGTTCAA-TTTGTTCAA | Design primers |
| 1535342 | CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA-CTA | Design primers |
| 1552011 | GATGGCGGC-GATGGCGGC-GATGGCGGC | Design primers |
| 1560513 | CCGGACGTG-CCGGACGTG-CCGGACGTG | Design primers |
| 1681837 | ACCAATCAGCGGGGT-ACCAATCAGCGGGGT-ACCAATCAGCGGGGT | Design primers |
| 1778364 | TTGTT-TTGTT-TTGTT-TTGTT-TTGTT | Design primers |
| 2031152 | AGCAGTAAA-AGCAGTAAA-AGCAGTAAA | Design primers |
| 2596180 | ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA | Design primers |
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