Microsatellites /Tandem Repeats database

Genome: Spirochaeta sp. Buddy

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
247278AAAAGTCTCCAGTGGATTACCGC-AAAAGTCTCCAGTGGATTACCGC-AAAAGTCTCCAGTGGATTACCGC-AAAAGTCTCCAGTGGATTACCGCDesign primers
247376GTCTCCAGTGGATTACCGCAAAA-GTCTCCAGTGGATTACCGCAAAA-GTCTCCAGTGGATTACCGCAAAA-GTCTCCAGTGGATTACCGCAAAADesign primers
2199668GGTAGGTTCTTCCACTAT-GGTAGGTTCTTCCACTAT-GGTAGGTTCTTCCACTAT-GGTAGGTTCTTCCACTATDesign primers
2199757TGGTAGGTTCTTCCACTA-TGGTAGGTTCTTCCACTA-TGGTAGGTTCTTCCACTA-TGGTAGGTTCTTCCACTADesign primers
2200470GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACADesign primers
2200670CAGCTCTTCCTCAACAGG-CAGCTCTTCCTCAACAGG-CAGCTCTTCCTCAACAGGDesign primers
2704675TCTGCATATTTA-TCTGCATATTTA-TCTGCATATTTADesign primers
3055149GCATCATCCAGCTCTTCT-GCATCATCCAGCTCTTCT-GCATCATCCAGCTCTTCTDesign primers
3055204TTTCAGGCAGCTCTTCTG-TTTCAGGCAGCTCTTCTG-TTTCAGGCAGCTCTTCTG-TTTCAGGCAGCTCTTCTG-TTTCAGGCAGCTCTTCTG-TTTCAGGCAGCTCTTCTGDesign primers
3055313TTCGGGCAGTTCTTCTGT-TTCGGGCAGTTCTTCTGT-TTCGGGCAGTTCTTCTGTDesign primers

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