This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
Position | Sequence | |
247278 | AAAAGTCTCCAGTGGATTACCGC-AAAAGTCTCCAGTGGATTACCGC-AAAAGTCTCCAGTGGATTACCGC-AAAAGTCTCCAGTGGATTACCGC | Design primers |
247376 | GTCTCCAGTGGATTACCGCAAAA-GTCTCCAGTGGATTACCGCAAAA-GTCTCCAGTGGATTACCGCAAAA-GTCTCCAGTGGATTACCGCAAAA | Design primers |
2199668 | GGTAGGTTCTTCCACTAT-GGTAGGTTCTTCCACTAT-GGTAGGTTCTTCCACTAT-GGTAGGTTCTTCCACTAT | Design primers |
2199757 | TGGTAGGTTCTTCCACTA-TGGTAGGTTCTTCCACTA-TGGTAGGTTCTTCCACTA-TGGTAGGTTCTTCCACTA | Design primers |
2200470 | GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACA-GGCAGCTCTTCCTCAACA | Design primers |
2200670 | CAGCTCTTCCTCAACAGG-CAGCTCTTCCTCAACAGG-CAGCTCTTCCTCAACAGG | Design primers |
2704675 | TCTGCATATTTA-TCTGCATATTTA-TCTGCATATTTA | Design primers |
3055149 | GCATCATCCAGCTCTTCT-GCATCATCCAGCTCTTCT-GCATCATCCAGCTCTTCT | Design primers |
3055204 | TTTCAGGCAGCTCTTCTG-TTTCAGGCAGCTCTTCTG-TTTCAGGCAGCTCTTCTG-TTTCAGGCAGCTCTTCTG-TTTCAGGCAGCTCTTCTG-TTTCAGGCAGCTCTTCTG | Design primers |
3055313 | TTCGGGCAGTTCTTCTGT-TTCGGGCAGTTCTTCTGT-TTCGGGCAGTTCTTCTGT | Design primers |
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