Microsatellites /Tandem Repeats database

Genome: Cellulophaga algicola DSM 14237

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
572412CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAADesign primers
681978TGGTTGA-TGGTTGA-TGGTTGA-TGGTTGA-TGGTTGADesign primers
748842TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGADesign primers
750700TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGADesign primers
751338TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGADesign primers
756151AAAAACTTAAA-AAAAACTTAAA-AAAAACTTAAADesign primers
1270275TGGTTGA-TGGTTGA-TGGTTGA-TGGTTGA-TGGTTGA-TGGTTGA-TGGTTGA-TGGTTGA-TGGTTGADesign primers
1344638GAAGAGATA-GAAGAGATA-GAAGAGATADesign primers
2221032ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCADesign primers
2728444AAGGAGATC-AAGGAGATC-AAGGAGATC-AAGGAGATCDesign primers
3291947ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCADesign primers
3392425TAT-TAT-TAT-TAT-TAT-TAT-TAT-TATDesign primers
3472142ATTTTATA-ATTTTATA-ATTTTATADesign primers
3644798ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATTDesign primers
3689842ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCADesign primers
3862322TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TATDesign primers
3885260ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCA-ACCATCADesign primers
4128793GAGTTACAGCAG-GAGTTACAGCAG-GAGTTACAGCAG-GAGTTACAGCAG-GAGTTACAGCAGDesign primers
4310343AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AATDesign primers
4406880AAG-AAG-AAG-AAG-AAG-AAG-AAG-AAG-AAGDesign primers
4593188TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAG-TAGDesign primers

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