Microsatellites /Tandem Repeats database

Genome: Achromobacter xylosoxidans A8

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
621876GCT-GCT-GCT-GCT-GCT-GCT-GCT-GCTDesign primers
738253TTGCCC-CTGCCC-CTGCCC-CTGCCC-CTGCCC-CTGCCC-CTGCCC-CTGCCC-CTGCCC-CTGCCCDesign primers
970557GGGGTCAAAACCTC-CGGGTCAAAACCTC-CGGGTCAAAACCTC-CGGGTCAAAACCTC-CGGGTCAAAACCTC-CGGGTCAAAACCTC-CGGGTCAAAACCTCDesign primers
1191041ATGACGGGC-ATGACGGGC-ATGACGGGCDesign primers
1191069TGACCGGGA-TGACCGGGA-TGACCGGGADesign primers
2064519GGATCAGGATCG-GGATCAGGATCG-GGATCGGGATCGDesign primers
2380631GCTTCGGGTGCGGCAGGG-ACTTCGGGTGCGGCAGGG-ACTTCGGGTGCGGCAGGG-ACTTCGGGTGCGGCAGGGDesign primers
2380713CGGCAGGCGCTTCGGGTGCAGCAGGCGCTTCGGGTGCAGCAGGCGCTTCGGGTGDesign primers
2380847ACTTCGGGCCCGGCAGGC-GCTTCGGGCCCGGCAGGC-GCTTCGGGCCCGGCAGGCDesign primers
2380931GCAGGCACTCCGGGTGCGGCAGGCACTCCGGGCGCGGCAGGCACTCCGGGCGCGDesign primers
3072677GCT-GCT-GCT-GCT-GCT-GCT-GCT-GCTDesign primers
3110946TCGGCGTAT-TCGGCGTAT-TCGGCGTATDesign primers
3159743GCCGCGCCTCAGCCGGCCACGCCTCAGCCGGCCGCACCTCAGCCGGCCGCACCTCAGCCGDesign primers
3474234TTTGTGGCGCACAGCTTCTGTGGCGCACAGCTTTTGTGGCGCACGGCTDesign primers
3893724GCTGCGGGCGGCCAGCTGCGGGCGGCGAGCTGCGGGCGGCCADesign primers
4049312CCTCTTTG-CCTCTTTG-CCTCTTTGDesign primers
4577069CCGAATCCTGGCCGGCCGAATCCCGGCCGGCCGAATCCCGGCCGGDesign primers
5926420GGCGGCATG-GGCGGCATG-GGCGGCATGDesign primers
6052697GGGCCGCGTCAGGCC-GAGCCGCGTCAGGCC-GAGCCGCGTCAGGCC-GGGCCGCGTCAGGCCDesign primers
6342029ACGCGACAGGCGTCATAAGAACTCGACAGGCGTCATAAGAACTCGACAGGCGTCACAAGADesign primers
6723844CATGGT-CGTGGT-CGTGGT-CGTGGT-CGTGGT-CGTGGT-CGTGGT-CGTGGTDesign primers

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