Microsatellites /Tandem Repeats database

Genome: Achromobacter xylosoxidans A8

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
621876GCT-GCT-GCT-GCT-GCT-GCT-GCT-GCTDesign primers
738254TGCCCC-TGCCCC-TGCCCC-TGCCCC-TGCCCC-TGCCCC-TGCCCC-TGCCCC-TGCCCC-TGCCCCDesign primers
970558GGGTCAAAACCTCC-GGGTCAAAACCTCC-GGGTCAAAACCTCC-GGGTCAAAACCTCC-GGGTCAAAACCTCC-GGGTCAAAACCTCCDesign primers
1191041ATGACGGGC-ATGACGGGC-ATGACGGGCDesign primers
1191069TGACCGGGA-TGACCGGGA-TGACCGGGADesign primers
2380632CTTCGGGTGCGGCAGGGA-CTTCGGGTGCGGCAGGGA-CTTCGGGTGCGGCAGGGA-CTTCGGGTGCGGCAGGGADesign primers
2380848CTTCGGGCCCGGCAGGCG-CTTCGGGCCCGGCAGGCG-CTTCGGGCCCGGCAGGCGDesign primers
3072677GCT-GCT-GCT-GCT-GCT-GCT-GCT-GCTDesign primers
3110946TCGGCGTAT-TCGGCGTAT-TCGGCGTATDesign primers
4049312CCTCTTTG-CCTCTTTG-CCTCTTTGDesign primers
5926420GGCGGCATG-GGCGGCATG-GGCGGCATGDesign primers
6723846TGGTCG-TGGTCG-TGGTCG-TGGTCG-TGGTCG-TGGTCG-TGGTCG-TGGTCGDesign primers

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