Microsatellites /Tandem Repeats database

Genome: Methanoplanus petrolearius DSM 11571

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
51306GTTGGA-GTTGGA-GTTGGA-GTTGGADesign primers
189259GCCTGCGTGAGCCTGCCTGAGCCTACGTGADesign primers
638228AG-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-ATDesign primers
928706AGAAACTAGGGA-AGAAACTAGGGA-AAAAACTAGGGADesign primers
1120137CCGACCCAGTTACCGACCCAGTTGGCGACCCAGTTADesign primers
1218593AATTTACTGAAGTTTACTGAAGTTTACTGADesign primers
1218624TGTTTACTGAA-TGTTTACTGAA-TGTTTACTGAA-TGTTTACTGAADesign primers
2291678GCAGCTTTGCAGCAACTTTGCAGCAGGTTTGCADesign primers

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