Microsatellites /Tandem Repeats database

Genome: Leuconostoc gasicomitatum LMG 18811

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
65323CAGTTATATTACAGTAATATTACAAGTATATTADesign primers
413747ATCCAACCGATCCAACGGATCCAACCADesign primers
484229CGG-CGG-CGG-TGG-CGG-CGG-TGG-CGGDesign primers
689788CATTAATATTAAGCTTAATATTAAAATTAATGTTAADesign primers
719611TGGATACGGTTATGGATATGGCTATGGATACGGGGADesign primers
757381TAAAAAAATAACAAAATCAAAAAADesign primers
965865GTTGGTGCAATTATTGGTGCAGTTGCAGGTGCAATTDesign primers
1228234TTGTAT-TTGTGT-TTGTGT-TTGTTTDesign primers
1311073GTTGTTGATGTTGTGGTTGTTCTTDesign primers
1342398ATAACATAATATATCATACCATAATDesign primers
1342807AGCTAGT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCT-TGTTGCTDesign primers
1531604TAATAACACATTATAAAACATAATAAAAAADesign primers
1574527ACCAA-ATCAA-ATCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAA-GCCAADesign primers
1631113TTTTGCAAC-CTTTGCAAC-CTTTGCAACDesign primers
1640704CTAAC-CTTAC-CTAAC-CTATC-CTTAC-CTAAC-CTAACDesign primers
1672917ATCTGCTGCTGGTGCAACAGG-TGCTGGTGTTGGTGCAACAGG-TGCTGGTGTTGGTGCAACAGG-TGCTGGTGTTGGTGCAACAGG-TGCTGGTGTTGGTGCAACAGGDesign primers
1673023GCTGGTGTTGATGCAGCAGGT-GCTGGTGTTGATGCAGCAGGT-GCTGGTGTTGATGCAGCAGGT-GCTGGTGTTGATGCAGCAGGT-GCTGGTGTTGATGCAGCAGGT-GCTGGTGTTGATGCAGCAGGT-GCTGGTGTTGATGCAGCAGGT-GCTGGTGTTGATGCAGCAGGT-GCTGGTGTTGATGCAGCAGGT-GCTGGTGTTGATGCAGCAGGTDesign primers

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