Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Methanococcus voltae A3

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
Position	Sequence
2730	AATATTATC-AATATTATC-AATATTATC-AATATTATC	Design primers
13515	TTATAAAAT-TTATAAAAT-TTATAAAAT	Design primers
17653	ATTATGATT-ATTATGATT-ATTATGATT	Design primers
22661	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
22744	ATTAATTTT-ATTAATTTT-ATTAATTTT	Design primers
25956	TTTTATTA-TTTTATTA-TTTTATTA	Design primers
29068	TTTCCA-TTTCCA-TTTCCA-TTTCCA	Design primers
31658	ATATAACAA-ATATAACAA-ATATAACAA-ATATAACAA	Design primers
37188	TTCTTCGTA-TTCTTCGTA-TTCTTCGTA	Design primers
47101	TAAAATAGTAAAT-TAAAATAGTAAAT-TAAAATAGTAAAT-TAAAATAGTAAAT	Design primers
48028	TTTAATAA-TTTAATAA-TTTAATAA-TTTAATAA	Design primers
55752	AATGAATT-AATGAATT-AATGAATT	Design primers
56507	TAATAAAATAATAAT-TAATAAAATAATAAT-TAATAAAATAATAAT-TAATAAAATAATAAT	Design primers
57188	TTTAAAAG-TTTAAAAG-TTTAAAAG	Design primers
58057	AATTAATCA-AATTAATCA-AATTAATCA	Design primers
59721	AAAATAAACT-AAAATAAACT-AAAATAAACT	Design primers
60486	TTATTATCTTATT-TTATTATCTTATT-TTATTATCTTATT-TTATTATCTTATT-TTATTATCTTATT-TTATTATCTTATT	Design primers
63026	TATTTTAA-TATTTTAA-TATTTTAA	Design primers
67060	TTTATTATTCATTAT-TTTATTATTCATTAT-TTTATTATTCATTAT	Design primers
68911	TTTTATTA-TTTTATTA-TTTTATTA	Design primers
70273	TGTTTATTGTA-TGTTTATTGTA-TGTTTATTGTA	Design primers
70310	TATATTG-TATATTG-TATATTG-TATATTG	Design primers
77771	TTATAAAAT-TTATAAAAT-TTATAAAAT	Design primers
81909	ATTATGATT-ATTATGATT-ATTATGATT	Design primers
86917	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
87000	ATTAATTTT-ATTAATTTT-ATTAATTTT	Design primers
90212	TTTTATTA-TTTTATTA-TTTTATTA	Design primers
93324	TTTCCA-TTTCCA-TTTCCA-TTTCCA	Design primers
95914	ATATAACAA-ATATAACAA-ATATAACAA-ATATAACAA	Design primers
101444	TTCTTCGTA-TTCTTCGTA-TTCTTCGTA	Design primers
111357	TAAAATAGTAAAT-TAAAATAGTAAAT-TAAAATAGTAAAT-TAAAATAGTAAAT	Design primers
112284	TTTAATAA-TTTAATAA-TTTAATAA-TTTAATAA	Design primers
120008	AATGAATT-AATGAATT-AATGAATT	Design primers
120763	TAATAAAATAATAAT-TAATAAAATAATAAT-TAATAAAATAATAAT-TAATAAAATAATAAT	Design primers
121444	TTTAAAAG-TTTAAAAG-TTTAAAAG	Design primers
122313	AATTAATCA-AATTAATCA-AATTAATCA	Design primers
123977	AAAATAAACT-AAAATAAACT-AAAATAAACT	Design primers
124742	TTATTATCTTATT-TTATTATCTTATT-TTATTATCTTATT-TTATTATCTTATT-TTATTATCTTATT-TTATTATCTTATT	Design primers
127282	TATTTTAA-TATTTTAA-TATTTTAA	Design primers
131316	TTTATTATTCATTAT-TTTATTATTCATTAT-TTTATTATTCATTAT	Design primers
133167	TTTTATTA-TTTTATTA-TTTTATTA	Design primers
134529	TGTTTATTGTA-TGTTTATTGTA-TGTTTATTGTA	Design primers
134566	TATATTG-TATATTG-TATATTG-TATATTG	Design primers
136468	AAATAATA-AAATAATA-AAATAATA	Design primers
137659	AAATAATAGAA-AAATAATAGAA-AAATAATAGAA-AAATAATAGAA-AAATAATAGAA-AAATAATAGAA-AAATAATAGAA-AAATAATAGAA-AAATAATAGAA	Design primers
138595	TAATAC-TAATAC-TAATAC-TAATAC	Design primers
138620	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
141239	TTTTTAAA-TTTTTAAA-TTTTTAAA	Design primers
144717	AATAT-AATAT-AATAT-AATAT-AATAT	Design primers
146124	CAAAAACTA-CAAAAACTA-CAAAAACTA	Design primers
147066	AAAATAATAAAGATA-AAAATAATAAAGATA-AAAATAATAAAGATA	Design primers
152013	AAAACGTTT-AAAACGTTT-AAAACGTTT	Design primers
155304	TATTATTATTT-TATTATTATTT-TATTATTATTT	Design primers
156394	TTATTAAA-TTATTAAA-TTATTAAA	Design primers
159353	TAAAAATA-TAAAAATA-TAAAAATA-TAAAAATA	Design primers
164062	ATTATTTTATT-ATTATTTTATT-ATTATTTTATT	Design primers
164109	TTATTATT-TTATTATT-TTATTATT	Design primers
166600	CAAAATAT-CAAAATAT-CAAAATAT	Design primers
169278	TTAAA-TTAAA-TTAAA-TTAAA-TTAAA	Design primers
173041	AAAATATAAAAAATATAAAAAATATAAAAAATATAA	Design primers
174048	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
176861	AAAATAATTA-AAAATAATTA-AAAATAATTA	Design primers
187580	AATAATAA-AATAATAA-AATAATAA-AATAATAA-AATAATAA	Design primers
187755	ATACTTTTA-ATACTTTTA-ATACTTTTA	Design primers
201077	TTATTAAT-TTATTAAT-TTATTAAT	Design primers
201611	AATTATAA-AATTATAA-AATTATAA-AATTATAA	Design primers
206623	ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA	Design primers
208813	GAAAAGATT-GAAAAGATT-GAAAAGATT	Design primers
210174	TTTTTAATCACTTTAA-TTTTTAATCACTTTAA-TTTTTAATCACTTTAA	Design primers
212496	ACTAAAAATAAA-ACTAAAAATAAA-ACTAAAAATAAA-ACTAAAAATAAA-ACTAAAAATAAA-ACTAAAAATAAA-ACTAAAAATAAA-ACTAAAAATAAA-ACTAAAAATAAA-ACTAAAAATAAA-ACTAAAAATAAA-ACTAAAAATAAA	Design primers
216648	TTTAATTAT-TTTAATTAT-TTTAATTAT	Design primers
219977	AATAATAT-AATAATAT-AATAATAT	Design primers
220160	TAAAATAGGAAATATAAAT-TAAAATAGGAAATATAAAT-TAAAATAGGAAATATAAAT	Design primers
221277	ATAAAATAATAAG-ATAAAATAATAAG-ATAAAATAATAAG-ATAAAATAATAAG-ATAAAATAATAAG	Design primers
224711	TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA	Design primers
226768	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
226820	TT-TT-AT-CT-AT-TT-TT-AT-CT-AT-TT-TT-AT-CT-AT	Design primers
229241	TCTATTCTT-TCTATTCTT-TCTATTCTT	Design primers
233045	TATTATAT-TATTATAT-TATTATAT	Design primers
237708	TTATACTTTATAAG-TTATACTTTATAAG-TTATACTTTATAAG	Design primers
239200	TTTATTAATATTAT-TTTATTAATATTAT-TTTATTAATATTAT	Design primers
240351	TATACAATTAT-TATACAATTAT-TATACAATTAT	Design primers
242065	AATAAAAATAG-AATAAAAATAG-AATAAAAATAG	Design primers
242149	AGAATAAA-AGAATAAA-AGAATAAA	Design primers
247492	TTTTATAAC-TTTTATAAC-TTTTATAAC	Design primers
249757	TTTTTAATC-TTTTTAATC-TTTTTAATC	Design primers
250357	TAATAATAC-TAATAATAC-TAATAATAC	Design primers
255300	GTATCAATAATAA-GTATCAATAATAA-GTATCAATAATAA	Design primers
256071	ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA	Design primers
258915	TTATTATCC-TTATTATCC-TTATTATCC	Design primers
261743	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
273189	AAAATAATAATA-AAAATAATAATA-AAAATAATAATA-AAAATAATAATA-AAAATAATAATA-AAAATAATAATA	Design primers
282328	TAGTTTAGTTAA-TAGTTTAGTTAA-TAGTTTAGTTAA	Design primers
290469	AGAATTT-AGAATTT-AGAATTT-AGAATTT	Design primers
290716	AA-AA-TA-AA-AA-AA-TA-AA-AA-AA-TA-AA	Design primers
303145	AATAATAA-AATAATAA-AATAATAA	Design primers
303831	TTATTATT-TTATTATT-TTATTATT	Design primers
307962	ATTTTA-ATTTTA-ATTTTA-ATTTTA	Design primers
314940	TAAATAACTAT-TAAATAACTAT-TAAATAACTAT-TAAATAACTAT-TAAATAACTAT-TAAATAACTAT-TAAATAACTAT	Design primers
318063	TTTATTAAAAG-TTTATTAAAAG-TTTATTAAAAG	Design primers
319884	TTTTTA-TTTTTA-TTTTTA-TTTTTA	Design primers
348484	TAAATACAC-TAAATACAC-TAAATACAC-TAAATACAC	Design primers
359706	ATTATTTTA-ATTATTTTA-ATTATTTTA-ATTATTTTA	Design primers
363317	ATAAAAAGAATAATAAA-ATAAAAAGAATAATAAA-ATAAAAAGAATAATAAA-ATAAAAAGAATAATAAA-ATAAAAAGAATAATAAA-ATAAAAAGAATAATAAA-ATAAAAAGAATAATAAA	Design primers
364464	AATAAAAAT-AATAAAAAT-AATAAAAAT-AATAAAAAT-AATAAAAAT	Design primers
364577	TTTCTTTAT-TTTCTTTAT-TTTCTTTAT	Design primers
366221	TAATTACTA-TAATTACTA-TAATTACTA	Design primers
368214	AATAAAAT-AATAAAAT-AATAAAAT	Design primers
371630	ATAAT-ATAAT-ATAAT-ATAAT-ATAAT-ATAAT-ATAAT	Design primers
372486	TT-TT-AT-TT-TT-AT-TT-TT-AT-TT-TT-AT	Design primers
373365	TATTTTCAC-TATTTTCAC-TATTTTCAC	Design primers
374468	TGTATTTATC-TGTATTTATC-TGTATTTATC	Design primers
379018	TTTGATACATA-TTTGATACATA-TTTGATACATA	Design primers
381728	ATTAACGTGTAATT-ATTAACGTGTAATT-ATTAACGTGTAATT-ATTAACGTGTAATT	Design primers
385552	ATTT-ATTT-ATTT-ATTT-ATTT-ATTT	Design primers
392450	AAAATAAATAAAATAAATAAAATAAAT	Design primers
395329	TTATTATT-TTATTATT-TTATTATT	Design primers
399157	TTTAAAATTAAAA-TTTAAAATTAAAA-TTTAAAATTAAAA	Design primers
402158	TATATTTT-TATATTTT-TATATTTT	Design primers
402211	ATTTTTATT-ATTTTTATT-ATTTTTATT	Design primers
404137	TTTAATTT-TTTAATTT-TTTAATTT	Design primers
407448	AATTAATTAG-AATTAATTAG-AATTAATTAG-AATTAATTAG	Design primers
411889	TAAACT-TAAACT-TAAACT-TAAACT	Design primers
412445	AAATAACTATTA-AAATAACTATTA-AAATAACTATTA	Design primers
412642	AAACTTAAAATT-AAACTTAAAATT-AAACTTAAAATT	Design primers
416740	TAATAATAG-TAATAATAG-TAATAATAG	Design primers
416768	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
418523	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
424333	ATTACAATAT-ATTACAATAT-ATTACAATAT-ATTACAATAT	Design primers
425807	AAAATAATA-AAAATAATA-AAAATAATA	Design primers
425835	AATAATAA-AATAATAA-AATAATAA	Design primers
429136	TAGATAATTCAG-TAGATAATTCAG-TAGATAATTCAG	Design primers
431859	ATCAATTTA-ATCAATTTA-ATCAATTTA	Design primers
441614	TAATTAA-TAATTAA-TAATTAA-TAATTAA	Design primers
442469	ATTAATTTC-ATTAATTTC-ATTAATTTC	Design primers
450362	TTAAATATTT-TTAAATATTT-TTAAATATTT	Design primers
452188	ATTTTTAATT-ATTTTTAATT-ATTTTTAATT	Design primers
453547	ATTTTTAAT-ATTTTTAAT-ATTTTTAAT	Design primers
455330	TTTTATTCTTA-TTTTATTCTTA-TTTTATTCTTA-TTTTATTCTTA	Design primers
458077	AAATTATAAGAT-AAATTATAAGAT-AAATTATAAGAT-AAATTATAAGAT-AAATTATAAGAT-AAATTATAAGAT	Design primers
458321	AACTTAAAA-AACTTAAAA-AACTTAAAA-AACTTAAAA	Design primers
461895	TAATAATATTAA-TAATAATATTAA-TAATAATATTAA	Design primers
463653	AATTATTTTA-AATTATTTTA-AATTATTTTA	Design primers
464120	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
465185	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
469060	TTAATCTT-TTAATCTT-TTAATCTT	Design primers
469089	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
470376	TTAATAAT-TTAATAAT-TTAATAAT	Design primers
473566	AACGAAAAA-AACGAAAAA-AACGAAAAA	Design primers
484584	TTTACCTTCAGTA-TTTACCTTCAGTA-TTTACCTTCAGTA-TTTACCTTCAGTA-TTTACCTTCAGTA-TTTACCTTCAGTA	Design primers
493830	TGGTAACT-TGGTAACT-TGGTAACT	Design primers
503497	TTGTTCTGATTCTTATTA-TTGTTCTGATTCTTATTA-TTGTTCTGATTCTTATTA-TTGTTCTGATTCTTATTA-TTGTTCTGATTCTTATTA-TTGTTCTGATTCTTATTA-TTGTTCTGATTCTTATTA-TTGTTCTGATTCTTATTA	Design primers
532359	AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT	Design primers
567278	TTATTATCT-TTATTATCT-TTATTATCT	Design primers
567307	ATTATATTC-ATTATATTC-ATTATATTC	Design primers
568836	TTTATTAG-TTTATTAG-TTTATTAG	Design primers
571629	GAAAATAAA-GAAAATAAA-GAAAATAAA	Design primers
595968	TAATTCAA-TAATTCAA-TAATTCAA	Design primers
596625	AATAAATT-AATAAATT-AATAAATT	Design primers
596667	TAAAAATA-TAAAAATA-TAAAAATA	Design primers
601373	TTATTT-TTATTT-TTATTT-TTATTT	Design primers
603602	TTATTAAT-TTATTAAT-TTATTAAT	Design primers
606368	AATTTGAAT-AATTTGAAT-AATTTGAAT	Design primers
609762	AATAAAATT-AATAAAATT-AATAAAATT	Design primers
610966	TAATAACTAAATAAT-TAATAACTAAATAAT-TAATAACTAAATAAT	Design primers
611023	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
613372	ATTTTTAT-ATTTTTAT-ATTTTTAT	Design primers
622546	TTTTATTA-TTTTATTA-TTTTATTA	Design primers
629547	ATTAAATCT-ATTAAATCT-ATTAAATCT	Design primers
633399	AATTTTGTA-AATTTTGTA-AATTTTGTA	Design primers
642059	AGAATAAATT-AGAATAAATT-AGAATAAATT	Design primers
642454	TTAATATTT-TTAATATTT-TTAATATTT	Design primers
646209	AATAAGTAATT-AATAAGTAATT-AATAAGTAATT	Design primers
646988	TATTTTTAAT-TATTTTTAAT-TATTTTTAAT-TATTTTTAAT	Design primers
648325	ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA	Design primers
648985	TTTTACTTT-TTTTACTTT-TTTTACTTT	Design primers
652668	TTTTA-TTTTA-TTTTA-TTTTA-TTTTA	Design primers
653785	TTATTTTCATTA-TTATTTTCATTA-TTATTTTCATTA	Design primers
655497	TTTTTATAAC-TTTTTATAAC-TTTTTATAAC	Design primers
657040	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
660528	ATTTAGATA-ATTTAGATA-ATTTAGATA	Design primers
664289	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
664355	ATATAAACCT-ATATAAACCT-ATATAAACCT	Design primers
667685	AATAAAAT-AATAAAAT-AATAAAAT-AATAAAAT	Design primers
668163	AA-AA-TA-AA-AA-TA-AA-AA-TA-AA-AA-TA	Design primers
669022	AAATAATT-AAATAATT-AAATAATT	Design primers
670431	TAAATTACTAT-TAAATTACTAT-TAAATTACTAT	Design primers
674111	TATTATTTT-TATTATTTT-TATTATTTT-TATTATTTT	Design primers
674564	TTTTATTAT-TTTTATTAT-TTTTATTAT	Design primers
687146	TTATTTAG-TTATTTAG-TTATTTAG	Design primers
689449	AATATTGAC-AATATTGAC-AATATTGAC	Design primers
689681	ATTTATTAG-ATTTATTAG-ATTTATTAG	Design primers
691041	AATTGATATTGAAT-AATTGATATTGAAT-AATTGATATTGAAT	Design primers
692874	ATTATTTT-ATTATTTT-ATTATTTT	Design primers
694509	AA-AA-GA-TA-AA-AA-GA-TA-AA-AA-GA-TA	Design primers
706257	AATAATAA-AATAATAA-AATAATAA	Design primers
708046	ATAATTGAT-ATAATTGAT-ATAATTGAT	Design primers
708162	TTTAAGTAATTAA-TTTAAGTAATTAA-TTTAAGTAATTAA	Design primers
715242	TATTATTTTAT-TATTATTTTAT-TATTATTTTAT-TATTATTTTAT	Design primers
718565	AATTATTAAAG-AATTATTAAAG-AATTATTAAAG-AATTATTAAAG	Design primers
720553	AAATTATTT-AAATTATTT-AAATTATTT-AAATTATTT	Design primers
722893	AATAATAA-AATAATAA-AATAATAA-AATAATAA	Design primers
724009	AAATCTCTTAAATTTTT-AAATCTCTTAAATTTTT-AAATCTCTTAAATTTTT	Design primers
726861	AAATAATAAT-AAATAATAAT-AAATAATAAT	Design primers
733973	AATAAAATAAT-AATAAAATAAT-AATAAAATAAT-AATAAAATAAT	Design primers
736732	ATTTTTGAATAT-ATTTTTGAATAT-ATTTTTGAATAT	Design primers
737654	TTTTTTAGT-TTTTTTAGT-TTTTTTAGT	Design primers
739398	AATAAAAT-AATAAAAT-AATAAAAT	Design primers
745129	TTATTATCG-TTATTATCG-TTATTATCG	Design primers
747810	AATAATAATACG-AATAATAATACG-AATAATAATACG-AATAATAATACG-AATAATAATACG-AATAATAATACG	Design primers
749663	TTTATTTTTACT-TTTATTTTTACT-TTTATTTTTACT	Design primers
754951	ATTAATTTA-ATTAATTTA-ATTAATTTA	Design primers
757303	AAAAAT-AAAAAT-AAAAAT-AAAAAT	Design primers
764683	AAAAAT-AAAAAT-AAAAAT-AAAAAT	Design primers
764722	TAAAAATAAAA-TAAAAATAAAA-TAAAAATAAAA	Design primers
773297	TATTATAT-TATTATAT-TATTATAT-TATTATAT	Design primers
773440	AAATGTTTA-AAATGTTTA-AAATGTTTA	Design primers
777361	TCTATTTAT-TCTATTTAT-TCTATTTAT	Design primers
781008	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
786719	TAATGAAGA-TAATGAAGA-TAATGAAGA	Design primers
792180	AATGAAAT-AATGAAAT-AATGAAAT	Design primers
793388	TTATTATT-TTATTATT-TTATTATT	Design primers
797427	TTTAATCTTAA-TTTAATCTTAA-TTTAATCTTAA	Design primers
802042	TAATCTAAG-TAATCTAAG-TAATCTAAG	Design primers
803102	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
811622	TAAAATAAATAAATAACTAAA-TAAAATAAATAAATAACTAAA-TAAAATAAATAAATAACTAAA	Design primers
815593	TT-TT-AT-TT-CT-TT-TT-AT-TT-CT-TT-TT-AT-TT-CT-TT-TT-AT-TT-CT	Design primers
816878	TTTTAAAG-TTTTAAAG-TTTTAAAG	Design primers
818083	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
821697	TATTAAAAA-TATTAAAAA-TATTAAAAA	Design primers
838257	TTTTTTGTAA-TTTTTTGTAA-TTTTTTGTAA	Design primers
840042	AAAAT-AAAAT-AAAAT-AAAAT-AAAAT	Design primers
844687	TATTTTTAAG-TATTTTTAAG-TATTTTTAAG	Design primers
846296	TAAAATAT-TAAAATAT-TAAAATAT	Design primers
848921	TAATAATATTAC-TAATAATATTAC-TAATAATATTAC	Design primers
851732	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
852220	TAATAAAG-TAATAAAG-TAATAAAG	Design primers
854007	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
856397	TAATAGTAATAA-TAATAGTAATAA-TAATAGTAATAA	Design primers
863737	TATTAATTATTATT-TATTAATTATTATT-TATTAATTATTATT-TATTAATTATTATT	Design primers
864372	TTAATT-TTAATT-TTAATT-TTAATT	Design primers
865955	TTTATTATTTA-TTTATTATTTA-TTTATTATTTA	Design primers
872432	AAAACTATAAAAT-AAAACTATAAAAT-AAAACTATAAAAT	Design primers
873194	TATTATTCTTAG-TATTATTCTTAG-TATTATTCTTAG-TATTATTCTTAG-TATTATTCTTAG	Design primers
875409	ACTAATAATAA-ACTAATAATAA-ACTAATAATAA-ACTAATAATAA	Design primers
876893	AAAAATAAAAATACT-AAAAATAAAAATACT-AAAAATAAAAATACT-AAAAATAAAAATACT	Design primers
877549	TT-TT-GT-AT-TT-TT-TT-GT-AT-TT-TT-TT-GT-AT-TT	Design primers
878299	TTATATT-TTATATT-TTATATT-TTATATT-TTATATT	Design primers
880545	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
882352	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
883617	ATTATATT-ATTATATT-ATTATATT-ATTATATT	Design primers
889326	TATTAG-TATTAG-TATTAG-TATTAG	Design primers
892903	TTTATTTTTTA-TTTATTTTTTA-TTTATTTTTTA	Design primers
896514	AATAATAA-AATAATAA-AATAATAA	Design primers
899565	TAAAATTAAT-TAAAATTAAT-TAAAATTAAT	Design primers
899614	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
904230	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
906679	AATAAA-AATAAA-AATAAA-AATAAA	Design primers
910374	AATAGATT-AATAGATT-AATAGATT	Design primers
912919	TTTTATTATTTATTTTATA-TTTTATTATTTATTTTATA-TTTTATTATTTATTTTATA-TTTTATTATTTATTTTATA-TTTTATTATTTATTTTATA	Design primers
913023	TTATTTTTTAAG-TTATTTTTTAAG-TTATTTTTTAAG-TTATTTTTTAAG-TTATTTTTTAAG	Design primers
916575	AAGTAAAT-AAGTAAAT-AAGTAAAT	Design primers
919216	ATAAAATA-ATAAAATA-ATAAAATA	Design primers
929171	TAAAAAAT-TAAAAAAT-TAAAAAAT	Design primers
938069	TAATATACA-TAATATACA-TAATATACA	Design primers
939068	ATATTTTA-ATATTTTA-ATATTTTA	Design primers
944733	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
944758	TTTATTATCTTATTAT-TTTATTATCTTATTAT-TTTATTATCTTATTAT	Design primers
945832	TATTATTT-TATTATTT-TATTATTT	Design primers
945880	ATTATTTT-ATTATTTT-ATTATTTT	Design primers
948359	AA-AA-TA-AA-AA-TA-AA-AA-TA-AA-AA-TA	Design primers
956693	TTATTTTATTC-TTATTTTATTC-TTATTTTATTC-TTATTTTATTC-TTATTTTATTC-TTATTTTATTC-TTATTTTATTC-TTATTTTATTC-TTATTTTATTC	Design primers
957538	AATTATCGT-AATTATCGT-AATTATCGT	Design primers
957566	ATTATAATA-ATTATAATA-ATTATAATA	Design primers
960654	GATAAAATAA-GATAAAATAA-GATAAAATAA	Design primers
961210	AA-AA-AA-TA-AA-AA-AA-TA-AA-AA-AA-TA	Design primers
971543	TACATAATT-TACATAATT-TACATAATT-TACATAATT	Design primers
974531	ATTATTATTAGT-ATTATTATTAGT-ATTATTATTAGT-ATTATTATTAGT	Design primers
982601	TAATTATT-TAATTATT-TAATTATT	Design primers
988541	TTATTATT-TTATTATT-TTATTATT	Design primers
988583	TTTTATTAGGTTATTA-TTTTATTAGGTTATTA-TTTTATTAGGTTATTA-TTTTATTAGGTTATTA-TTTTATTAGGTTATTA-TTTTATTAGGTTATTA-TTTTATTAGGTTATTA-TTTTATTAGGTTATTA-TTTTATTAGGTTATTA	Design primers
989700	TAAAA-TAAAA-TAAAA-TAAAA-TAAAA	Design primers
990644	TTTTATTAT-TTTTATTAT-TTTTATTAT	Design primers
993314	TATTTTAT-TATTTTAT-TATTTTAT	Design primers
997183	TTATAAAAATA-TTATAAAAATA-TTATAAAAATA	Design primers
1001358	TTAATAATT-TTAATAATT-TTAATAATT	Design primers
1001862	TTATTTTACTTTA-TTATTTTACTTTA-TTATTTTACTTTA-TTATTTTACTTTA-TTATTTTACTTTA-TTATTTTACTTTA	Design primers
1003913	TTATATCATAT-TTATATCATAT-TTATATCATAT-TTATATCATAT	Design primers
1005095	ATATTTA-ATATTTA-ATATTTA-ATATTTA	Design primers
1006094	TAATTATAT-TAATTATAT-TAATTATAT-TAATTATAT-TAATTATAT-TAATTATAT	Design primers
1009995	ATATATTGG-ATATATTGG-ATATATTGG	Design primers
1013698	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
1015424	TAAATAAATAT-TAAATAAATAT-TAAATAAATAT	Design primers
1027082	AATATAAAA-AATATAAAA-AATATAAAA	Design primers
1030722	ATTATTCT-ATTATTCT-ATTATTCT-ATTATTCT	Design primers
1032552	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1033885	AAATAATAAATAAA-AAATAATAAATAAA-AAATAATAAATAAA-AAATAATAAATAAA	Design primers
1034699	AAAATAATTAT-AAAATAATTAT-AAAATAATTAT-AAAATAATTAT	Design primers
1035647	TTTAAATTATTGAA-TTTAAATTATTGAA-TTTAAATTATTGAA-TTTAAATTATTGAA	Design primers
1039931	AAATTAAT-AAATTAAT-AAATTAAT	Design primers
1044032	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
1047755	ATGTTAAGT-ATGTTAAGT-ATGTTAAGT	Design primers
1049936	TAATTAAATGAAA-TAATTAAATGAAA-TAATTAAATGAAA-TAATTAAATGAAA	Design primers
1057134	TTTATTAA-TTTATTAA-TTTATTAA-TTTATTAA	Design primers
1070190	CTATTATTATTA-CTATTATTATTA-CTATTATTATTA	Design primers
1081389	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1083734	TATTATTAG-TATTATTAG-TATTATTAG	Design primers
1084286	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
1087746	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
1090258	TAATAATAG-TAATAATAG-TAATAATAG	Design primers
1091481	TTGGTATATTCT-TTGGTATATTCT-TTGGTATATTCT	Design primers
1092650	ATAAAGTATA-ATAAAGTATA-ATAAAGTATA	Design primers
1092791	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
1093554	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1093583	TTAGTA-TTAGTA-TTAGTA-TTAGTA	Design primers
1095214	ATATAATA-ATATAATA-ATATAATA	Design primers
1102738	TATTTTATTA-TATTTTATTA-TATTTTATTA-TATTTTATTA	Design primers
1102779	ATTTTTATTTT-ATTTTTATTTT-ATTTTTATTTT	Design primers
1103471	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
1105507	ATACTAAAATCTGT-ATACTAAAATCTGT-ATACTAAAATCTGT	Design primers
1106910	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1106935	ACTATTATT-ACTATTATT-ACTATTATT	Design primers
1108584	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1110783	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1111302	TTATTAA-TTATTAA-TTATTAA-TTATTAA	Design primers
1112387	ATT-ATT-TTT-ATT-ATT-TTT-ATT-ATT-TTT	Design primers
1121461	ATTAAA-ATTAAA-ATTAAA-ATTAAA	Design primers
1131792	AAAATAATAT-AAAATAATAT-AAAATAATAT-AAAATAATAT-AAAATAATAT-AAAATAATAT	Design primers
1133027	TATTTTAT-TATTTTAT-TATTTTAT	Design primers
1134419	TTTTGAAA-TTTTGAAA-TTTTGAAA	Design primers
1141823	TATTATTAC-TATTATTAC-TATTATTAC	Design primers
1142781	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1143881	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1144657	TTAAATGAT-TTAAATGAT-TTAAATGAT	Design primers
1151940	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
1161837	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1162399	ATTGTT-ATTGTT-ATTGTT-ATTGTT	Design primers
1162424	TTA-TTA-GTA-TTA-TTA-GTA-TTA-TTA-GTA-TTA-TTA-GTA	Design primers
1164958	TGAAAA-TGAAAA-TGAAAA-TGAAAA	Design primers
1165124	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
1172493	AATAATAT-AATAATAT-AATAATAT-AATAATAT-AATAATAT	Design primers
1178902	TTCTTCTGA-TTCTTCTGA-TTCTTCTGA	Design primers
1181562	TTTAAAATATC-TTTAAAATATC-TTTAAAATATC	Design primers
1185322	TATTTTA-TATTTTA-TATTTTA-TATTTTA-TATTTTA	Design primers
1187813	TTAATAAA-TTAATAAA-TTAATAAA	Design primers
1188180	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
1209273	TTATTATTC-TTATTATTC-TTATTATTC-TTATTATTC	Design primers
1210313	ATTTTTA-ATTTTTA-ATTTTTA-ATTTTTA	Design primers
1216843	TTATTAAA-TTATTAAA-TTATTAAA	Design primers
1218133	TATATTTT-TATATTTT-TATATTTT	Design primers
1219548	TAATAATTATAC-TAATAATTATAC-TAATAATTATAC	Design primers
1235372	GAATTAATT-GAATTAATT-GAATTAATT	Design primers
1236013	TTATTATCT-TTATTATCT-TTATTATCT	Design primers
1238983	AGTTATTTG-AGTTATTTG-AGTTATTTG	Design primers
1240173	TAAATTGATTT-TAAATTGATTT-TAAATTGATTT	Design primers
1244189	TTA-TTA-GTA-TTA-TTA-GTA-TTA-TTA-GTA	Design primers
1248061	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
1250277	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
1251783	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
1254551	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
1285229	AAATAAAAAG-AAATAAAAAG-AAATAAAAAG-AAATAAAAAG	Design primers
1289926	TTTTATTA-TTTTATTA-TTTTATTA-TTTTATTA	Design primers
1289960	TTATTATT-TTATTATT-TTATTATT	Design primers
1298193	AACTAAAA-AACTAAAA-AACTAAAA	Design primers
1302045	TGTAATAGATA-TGTAATAGATA-TGTAATAGATA	Design primers
1302295	ATTATAAT-ATTATAAT-ATTATAAT	Design primers
1307285	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
1308141	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
1314403	GATAATAAA-GATAATAAA-GATAATAAA	Design primers
1319537	TAAAAT-TAAAAT-TAAAAT-TAAAAT	Design primers
1322380	TTAATAGC-TTAATAGC-TTAATAGC	Design primers
1327246	GTAAATAACTAA-GTAAATAACTAA-GTAAATAACTAA	Design primers
1330132	GTAATAATAATA-GTAATAATAATA-GTAATAATAATA	Design primers
1333087	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
1338204	AAAAATACT-AAAAATACT-AAAAATACT	Design primers
1341707	TTATTATAA-TTATTATAA-TTATTATAA-TTATTATAA	Design primers
1346562	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1350317	AAAAATATA-AAAAATATA-AAAAATATA	Design primers
1350361	AATAATTT-AATAATTT-AATAATTT	Design primers
1353577	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
1361602	AATTTTAATAATA-AATTTTAATAATA-AATTTTAATAATA	Design primers
1365227	TAATAATTA-TAATAATTA-TAATAATTA	Design primers
1373649	TGAAAAAAC-TGAAAAAAC-TGAAAAAAC	Design primers
1381733	TTTATTAT-TTTATTAT-TTTATTAT	Design primers
1383325	ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT-ATT	Design primers
1385853	ATTTATTTAGT-ATTTATTTAGT-ATTTATTTAGT	Design primers
1386578	AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT	Design primers
1390644	ATTTTATT-ATTTTATT-ATTTTATT	Design primers
1391889	TTTAATTAT-TTTAATTAT-TTTAATTAT-TTTAATTAT	Design primers
1402644	TATTTACT-TATTTACT-TATTTACT-TATTTACT	Design primers
1407332	TTATAAC-TTATAAC-TTATAAC-TTATAAC-TTATAAC	Design primers
1413974	AATAT-AATAT-AATAT-AATAT-AATAT	Design primers
1415028	ATAG-ATAG-ATAG-ATAG-ATAG-ATAG-ATAG	Design primers
1415455	ATATACTAACTAA-ATATACTAACTAA-ATATACTAACTAA-ATATACTAACTAA	Design primers
1425384	AAAAAGAT-AAAAAGAT-AAAAAGAT	Design primers
1426126	TTTTTAA-TTTTTAA-TTTTTAA-TTTTTAA	Design primers
1432068	TTATTTTCTTA-TTATTTTCTTA-TTATTTTCTTA	Design primers
1441856	TTTATTTG-TTTATTTG-TTTATTTG-TTTATTTG	Design primers
1475480	ATTATTAAG-ATTATTAAG-ATTATTAAG	Design primers
1480250	AATAAAAATAATAATAAAA-AATAAAAATAATAATAAAA-AATAAAAATAATAATAAAA	Design primers
1480557	TATAT-TATAT-TATAT-TATAT-TATAT	Design primers
1483050	TT-TT-AT-GT-TT-TT-AT-GT-TT-TT-AT-GT	Design primers
1501842	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
1511240	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1512335	AATAAAAAAT-AATAAAAAAT-AATAAAAAAT	Design primers
1527399	TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA-TTA	Design primers
1548845	AAAT-AAAT-AAAT-AAAT-AAAT-AAAT	Design primers
1564829	TATATTAT-TATATTAT-TATATTAT-TATATTAT	Design primers
1571985	ATA-ATA-CTA-ATA-ATA-CTA-ATA-ATA-CTA	Design primers
1572520	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1626116	TTTTTATA-TTTTTATA-TTTTTATA	Design primers
1627989	TTAATTAAAAC-TTAATTAAAAC-TTAATTAAAAC	Design primers
1631038	TTTTAA-TTTTAA-TTTTAA-TTTTAA	Design primers
1637563	ATTTTT-ATTTTT-ATTTTT-ATTTTT	Design primers
1638685	AAAAAATAAAAAATAAAAAATAAAAAAT	Design primers
1639922	TAATCTTT-TAATCTTT-TAATCTTT	Design primers
1640890	TTAGTATTAA-TTAGTATTAA-TTAGTATTAA	Design primers
1645254	TTCTTATAA-TTCTTATAA-TTCTTATAA-TTCTTATAA-TTCTTATAA	Design primers
1650719	ATTTTTATTATT-ATTTTTATTATT-ATTTTTATTATT	Design primers
1654593	AAAAATCA-AAAAATCA-AAAAATCA	Design primers
1655778	AATAT-AATAT-AATAT-AATAT-AATAT	Design primers
1668525	TAATTTTTT-TAATTTTTT-TAATTTTTT	Design primers
1681740	TAAAATAATT-TAAAATAATT-TAAAATAATT	Design primers
1688215	GATAGAAAC-GATAGAAAC-GATAGAAAC	Design primers
1688571	TTTATTATTTTAT-TTTATTATTTTAT-TTTATTATTTTAT	Design primers
1693083	AATAAAAA-AATAAAAA-AATAAAAA	Design primers
1697360	TT-TT-AT-TT-TT-TT-AT-TT-TT-TT-AT-TT	Design primers
1699387	ATTTT-ATTTT-ATTTT-ATTTT-ATTTT	Design primers
1701246	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
1701307	ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA	Design primers
1702565	TATAATAAA-TATAATAAA-TATAATAAA	Design primers
1731119	ATCATT-ATCATT-ATCATT-ATCATT-ATCATT-ATCATT	Design primers
1731175	CATTAG-CATTAG-CATTAG-CATTAG	Design primers
1746787	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1749822	TTTAAGTTA-TTTAAGTTA-TTTAAGTTA	Design primers
1759157	TAATTAA-TAATTAA-TAATTAA-TAATTAA	Design primers
1760517	AATATCTTA-AATATCTTA-AATATCTTA	Design primers
1760623	TAATAATA-TAATAATA-TAATAATA	Design primers
1780156	ATTATTTAATT-ATTATTTAATT-ATTATTTAATT	Design primers
1783071	AATATAAAAA-AATATAAAAA-AATATAAAAA-AATATAAAAA	Design primers
1784317	TTTTATTAA-TTTTATTAA-TTTTATTAA	Design primers
1789626	TTAATTAC-TTAATTAC-TTAATTAC	Design primers
1791838	TTAATTA-TTAATTA-TTAATTA-TTAATTA	Design primers
1798754	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1803416	AATACTAATAAT-AATACTAATAAT-AATACTAATAAT-AATACTAATAAT	Design primers
1812506	AATAATTT-AATAATTT-AATAATTT-AATAATTT	Design primers
1815278	AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT	Design primers
1821001	TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA	Design primers
1821244	TAATAAAAAA-TAATAAAAAA-TAATAAAAAA	Design primers
1825024	AAAGAATCG-AAAGAATCG-AAAGAATCG	Design primers
1826005	GAATAATAA-GAATAATAA-GAATAATAA-GAATAATAA	Design primers
1830656	ATTTTATT-ATTTTATT-ATTTTATT	Design primers
1830839	TAATAAAA-TAATAAAA-TAATAAAA	Design primers
1832728	ATAATAAA-ATAATAAA-ATAATAAA	Design primers
1843206	AATAATAATACT-AATAATAATACT-AATAATAATACT-AATAATAATACT	Design primers
1845279	AAATTAAAAT-AAATTAAAAT-AAATTAAAAT	Design primers
1856179	ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA	Design primers
1870045	TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA	Design primers
1875799	AATTACATA-AATTACATA-AATTACATA	Design primers
1879321	TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA-TAA	Design primers
1889312	ATTAAATTACAT-ATTAAATTACAT-ATTAAATTACAT	Design primers
1890922	TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT	Design primers
1895310	TTATAGAT-TTATAGAT-TTATAGAT	Design primers
1910950	TATTTT-TATTTT-TATTTT-TATTTT	Design primers
1910989	ATTTATTACTTA-ATTTATTACTTA-ATTTATTACTTA	Design primers
1912266	AATAAAAAAG-AATAAAAAAG-AATAAAAAAG-AATAAAAAAG-AATAAAAAAG-AATAAAAAAG-AATAAAAAAG	Design primers
1914451	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
1915447	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
1917241	AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT	Design primers
1923308	AATAAATAAACAAT-AATAAATAAACAAT-AATAAATAAACAAT-AATAAATAAACAAT-AATAAATAAACAAT	Design primers
1927308	ATAATTAAAA-ATAATTAAAA-ATAATTAAAA	Design primers
1929239	AAATTATAG-AAATTATAG-AAATTATAG	Design primers
1930728	TTTATTTTC-TTTATTTTC-TTTATTTTC	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

2730

AATATTATC-AATATTATC-AATATTATC-AATATTATC