Microsatellites /Tandem Repeats database

Genome: Comamonas testosteroni CNB-2

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
725901GCCCATGCC-GCCCATGCC-GCCCATGCCDesign primers
1290293GCTGACGCTCCTGCTGCCCCCGCCGCTGACGCTCCTGCTGCTCCTGCCGCTGACGCTCCTGCTGCTCCCGCCDesign primers
1725143CTGTGTCG-CCGTGTCG-CCGTGTCG-CCGTGTCG-CCGTGTCG-CCGTGTCGDesign primers
1899166TGTGCG-TGTGCA-TGTGCA-TGTGCA-TGTGCA-TGTGCADesign primers
2016243AAAGCCGGCAACAAAGCCGGTAACAAAGGCGGCAACDesign primers
2104053GCCACCAGT-GCCACCAGT-GCCACCAGT-GCCACCAGTDesign primers
2158543TCAACGCA-TCAACGCA-TCAACGCADesign primers
2535219TGTCGG-CATCGG-CATCGG-CATCGG-CATCGG-CATCGG-CATCGG-CATCGG-CATCGG-CATCGG-CATCGG-CATCGGDesign primers
2577401ACTCGC-ACTCGC-ACTCGC-ACTCGC-ACTCGCDesign primers
2577432CTAGCA-CTAGCA-CTAGCA-CTAGCADesign primers
2865178TGGGATGACGGGCATGTC-TGGGATGACCGGCATGTC-TGGGATGACCGGCATGTC-TGGGATGACCGGCATGTCDesign primers
2985986GGATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCC-AAATGCCDesign primers
3231988GGCTGGCTGC-TGCTGGCTGC-TGCTGGCTGCDesign primers
3250853CACAGCCAA-CACAGCCAA-CACAGCCAA-CACAGCCAADesign primers
4248456CGTTCC-GGTTCC-GGTTCC-GGTTCC-GGTTCC-GGTTCC-GGTTCC-GGTTCC-GGTTCC-GGTTCCDesign primers
4579036CCTGAATAGACCTGAATGGACCTGAATCGADesign primers
4793829CCGGGG-CCGGGG-CCGGGG-CCGGGGDesign primers
4850996CGGCGCTCGTCGTTG-CGGCGGTCGTCGTTG-CGGCGGTCGTCGTTG-CGGCGGTCGTCGTTG-CGGCGGTCGTCGTTGDesign primers
5207949CGCGAA-CACGAA-CACGAA-CACGAA-CACGAA-CACGAA-CACGAA-CACGAADesign primers

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