Microsatellites /Tandem Repeats database

Genome: Escherichia coli O26:H11 str. 11368

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
252587CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGA-CTCTGADesign primers
323886CTAGGGGGTAGGTCATAGTGAG-CTAGGGGGTAGGTCATAGTGAG-CTAGGGGGTAGGTCATAGTGAG-CTAGGGGGTAGGTCATAGTGAGDesign primers
1561449GCTGCACTG-GCTGCACTG-GCTGCACTGDesign primers
1608813CGGCAGGCC-CGGCAGGCC-CGGCAGGCCDesign primers
3123140AGAAAT-AGAAAT-AGAAAT-AGAAAT-AGAAAT-AGAAAT-AGAAAT-AGAAATDesign primers
4797089ACCTGC-ACCTGC-ACCTGC-ACCTGC-ACCTGC-ACCTGC-ACCTGC-ACCTGC-ACCTGCDesign primers
5509622AATATATG-AATATATG-AATATATGDesign primers
5576064GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTG-GCTGDesign primers
5583679CCTTCGCA-CCTTCGCA-CCTTCGCADesign primers

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