Microsatellites /Tandem Repeats database

Genome: Lactobacillus rhamnosus GG

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
211581ATTTAAGGCAATTTAAGCGAATTTAAGTCADesign primers
298922TGTTCTGCTGCAGCTTTTTCGGCTGCGGCTTTTTCAGCTGCAGCCDesign primers
326503AAGCTGCTGCATCTCAGGCGGCTGCATCACAAGCCGCAGCGTCTCAGGCTGCCGCATCGCAAGCCGCAGCATCACAAGCTGCAGCGTCTCAGGCGGCTGCATCACDesign primers
452400TGATTATTACGGATTAGTACTGATTCTTCCDesign primers
709488GCTGCCCAT-GCTGCCCAT-GCCGCCCATDesign primers
901270TTAAAATGTTAAGATGTTAGAATGDesign primers
1022623TCG-TCA-TAG-TCA-TCA-TCA-TCG-TCG-TCA-TCADesign primers
1113302ATAGTAGGCAACACGGTAGGCAACCTAGTAGGCAACDesign primers
1528553CATGTTTTCCCTCATGTTATCTCTCATGTTTTCCCTDesign primers
1540430TGTTGCTTTTGCTGTTGCTGTTGTDesign primers
1551776ATTATTTATTGTTTATGATTTATCATTTDesign primers
1560649CATAACTACACAACTACACAACTADesign primers
1682752GGCAATCGCAATTGCAATGACAATDesign primers
2171018GAATCATCGGCGGATTCATGGGCGTGATCATCGGCGDesign primers
2279877AAAAACCAAAAACCCAAAAAACCADesign primers
2292369GCGCTGGAAGCAGCAGCGTTGGATGCCGCAACACTGGAAGCTGCAGCGCTTGATGCAGCGGCGCTAGAGGCAGCCDesign primers
2351728GGCTTGTGTTGGCTT-CGTTTGTGTTGGCTT-CGTCTGTGTTGGCTTDesign primers
2443070AACTTTCTTACTTTCTAACATTCTDesign primers
2530917AGCCACATAAAGCCGCAAAAAGCCACAGATDesign primers
2666709CCGCCACGGCCACCGCCGCCGCGACCGCCGDesign primers
2955010GTGCGGGACAGCTCGGGACAGCTCGGGACADesign primers
2962960ATTGATAATCAATGATAACCAATGACAATCDesign primers

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