Microsatellites /Tandem Repeats database

Genome: Streptococcus suis BM407

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
129119GAAAATATAGAAAAATATAGAAAAATATGGDesign primers
185383AACTCCGGTACCGGACACTCCGGCACCGGACACTCCGGCACCGAADesign primers
352000GACTTGAATTGACTCGACTTGATTTDesign primers
489907TTGTTTTTTCTTTGTTTTTCGTATGTTTTTTCADesign primers
505274ACTGAAGGAAGTGAAACTGAATATAGTGAAACTGAAGGGAGTGATDesign primers
752639AAATATTTCAAAAACATTTCAGAAAAATTACAADesign primers
872598AGTTTAAGTTTTGTTTAATTTTATTTTCAGTTTDesign primers
946538AAAAAAACAAACAAAAATAAAATAADesign primers
967572TTCACTAACAAATTCACTGATAAATTCACTGATAAADesign primers
1006618ACTGAAGGAAGTGAAACTGAATATAGTGAAACTGAAGGGAGTGATDesign primers
1278666CAAGC-TTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTGDesign primers
1300995CAAAGACAAAGGAAAAGACAAAGGDesign primers
1331744TGCTTCTGCTTTCGCTTCTTCTTCDesign primers
1504443ATTACAACACCTTACAACGCTTAACAACACDesign primers
1704688AGTTGAAGATGAAGTTGAAGTAGADesign primers
1728752AATAAAAACATTATAA-TCAAAAAACATTATAA-TCAAAAAACATTATAADesign primers
1826811TCTTCCTCTTGCTCTACCTCTTCCDesign primers
2043450TTTCCATTCCTTTCTTTTCTTCTCCDesign primers

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