Microsatellites /Tandem Repeats database

Genome: Bifidobacterium animalis subsp. lactis DSM 10140

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
110199GCAGAGTT-GCAGAGTT-GCAGAGTTDesign primers
110224CGGATTTG-CGGATTTG-CGGATTTGDesign primers
179934GCAGATAGG-GCAGATAGG-GCAGATAGGDesign primers
198819CGGAGGCAA-CGGAGGCAA-CGGAGGCAA-CGGAGGCAADesign primers
254584CTGTTGTTGCTGCCGTTGTTGCTGCCGTTGTTGCTGDesign primers
258484TTTTACGCAGACGG-ATTTACGCAGACGG-ATTTACGCAGACGGDesign primers
284586GCGCGCGAGGGCGTGCGAGGGCGCGCGGGGDesign primers
296158GCGCTAATGCTTACGGGATGTCGTTAATGCTTACGGGATGTCGTTAATGCTTACGGGATGDesign primers
332022CGCGGTGGTTGCGCCAGGGT-GCCGGTGGTTGCGCCAGGGT-GCCGGTGGTTGCGCCAGGGTDesign primers
333807AGGGGTAGAGGGGGGTAGAGAGGGGTAGAGDesign primers
336342AAGAAAGGC-AAGAAAGGC-AAGAAAGGCDesign primers
509392GGTGGATTG-GGTGGATTG-GGTGGATTGDesign primers
542636AGGTCGCGCACAGATCGCGCACAGATCGCGCACDesign primers
627134GCAGATTG-GCAGATTG-GCAGATTGDesign primers
770315TCGCCGTCGCAG-TCGCCGTCGCAG-TCGCCATCGCAGDesign primers
1323886CATCACTTGGACATCACCTGGACATCACTTGGADesign primers
1344957ATATTTCA-ATATTTCA-ATATTTCADesign primers

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