Microsatellites /Tandem Repeats database

Genome: Sulfolobus islandicus Y.N.15.51

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
114328AGTTAATTAATTAATTAGGTAATTDesign primers
132575ATTAAT-ATTAAT-ATTGAT-ATTAGTDesign primers
425206CTATTATTATGACTATTATTACAACTGCTATTATGADesign primers
425391GTTGTTGTAGTAGTTGTTGATGTACTTGTGGTAGTADesign primers
620790AGTAAAAGAAAAAGTAATAGAAAADesign primers
849764CATTATTTCCAATATTTCCATTATTTTDesign primers
1102263AATTAT-AATTAT-ACTTAT-TATTATDesign primers
1390464TAAGGCATATTAAGCAATATTAAGAGATATDesign primers
1431123TAATAGGAATAGTAGTAGCAATAGTAATAADesign primers
1444320TTATTTATAAGAATTTATAAATATTTTTAADesign primers
1671976CCTAGCCCTATCCCTAGTCCTAGCDesign primers
1729727TACCATTTCTTACCCATTCTTACCCTTTCADesign primers
1775829AAAAATATTAATAATATTAAAAATATCDesign primers
1783289TTCTATAATCAGAGTACTTGCTATAATCAGAGTACTTGCTATAATCAGCATACTDesign primers
1854638AAGAGAAATTGAAAGAAATTTAGAGAGATTDesign primers
1903814AAATGTATATAAATATATAAAAGTATATATDesign primers
2139779AT-TT-TT-AT-AT-CT-TT-TA-AT-AT-TT-TT-TT-AT-CTDesign primers
2156442TAATTTTAATCTTAATTATAATTCDesign primers
2161772TCTTTATCTTAATCTTTCTCTTTCDesign primers
2273821TGTAGTCGTAGTTGTACTTGTTGTDesign primers
2308306AAG-ATG-AAG-AAG-AGG-ATG-AAG-AAGDesign primers
2330605AATTAGAAGTAATTAAAAGTAAAGAGAAGTDesign primers
2448160GGTGGAAGAAGATATGGAAGAAGAGGCGGAAGAAGADesign primers
2519749AATAAAATTAAAAATATAAGTAAADesign primers
2556724TTTTTATTTTAATTTTTGTTTTAADesign primers
2707983AAGAGG-AAGAGG-TAGAGG-AGGAGGDesign primers
2752803TATTTTTATTTCCATTTTTATTATDesign primers
2783725TAAAAG-TAAAAG-TAAACG-AAAAAGDesign primers

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