Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Corynebacterium aurimucosum ATCC 700975

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
167506	TGCGACGAGCGTCGACGAGCTGCGCCAAGC	Design primers
192300	TGGTTCGGACAGATCCGTTGGTTCGGGCAGTTCCGTTGGTTCAGACAGCTTCGT	Design primers
192840	CGCCGCAGCCGCCCCCGCCGCGGC	Design primers
206186	ACCACTCCGCCG-ACCACTCCGCCG-TCCACCCCGCCG	Design primers
252599	TCGACGAAGAAGGCCACGAAGAAGTCGAGTAAGAAG	Design primers
255283	TC-GC-GC-AC-GC-GC-TG-GC-GC-TC-AC-GC	Design primers
437780	ATGGCGATGGCCATGGTGATGCCG	Design primers
619264	AAGGCCGAGGTCAACAAGGCCGAAATCAACAAAGCTGAGATCAAC	Design primers
1030045	CGAAGCCGAGGCCGATGCCGAAGA	Design primers
1060331	GCGCTGGCGTTGCCGGTGCTGGCGTAGCTGGCGCTGGTGTTGCCG	Design primers
1110202	ACCCAGACACTCCGGACAACCCCGACAACCCGGACAAGCCGGACACTCCGGACA	Design primers
1110263	CAACCCTGATGAGCCAGG-CAAGCCGGACGAGCCAGG-CAAGCCGGACGAGCCAGG-CAAGCCGGACGAGCCAGG-CAAGCCGGACGAGCCAGG-CAAGCCGGACGAGCCAGG	Design primers
1121453	CGA-CGA-CGA-TGA-TGA-CGA-TGA-CGA	Design primers
1184353	CCGCCGCAA-CCGCCGCAA-CCGTCGCAA	Design primers
1225092	TTCTAGAATTCCAGAAATCTAGAA	Design primers
1421663	TCGTCGTCGTTGTGGTCGTCATCG	Design primers
1448739	GAGCGGTGCCGCGAGGTGCCGAGCACTGCC	Design primers
1510272	CACCAG-CCCCAG-CCCCAG-CCCCAG	Design primers
1565153	TAAGGACAAGGA-TAAGGACAAGGA-TAAGGACAAGGA	Design primers
1611192	AGAAGACCGCCAAGAAGACGGCAAAAAAGACAGCCAAGAAGACGGCTAAGAAAACCGCGA	Design primers
1662201	CTC-TTC-CTC-ATC-TTC-TTC-ATC-TTC	Design primers
1683778	ACAAGC-CCAAGC-CCAAGC-CCAAGC	Design primers
1697540	GCACCCGGCTTCGGTGCACCACCTGGCTTCGGTGCACCACCTGGCTTCGGAGCAGCACCGGGCTTGGGGGCA	Design primers
1778847	CATCAGCTTCAGCATTAGCCTCAG	Design primers
1800863	CTTCTTCTCCTCAGAAGTCTTCTCCTCAGACGTCTTTTCCTTAGA	Design primers
1916300	GTCGCGGCCGCGGTGGCGGTTGCG	Design primers
1941691	CGGAGCGGGAGCTGGTGCGGGAGCCGGAGCAGGTGCCGGAGCAGGAGC	Design primers
1998186	CGGTGGCTTCGGCGGTGGCTTCTCCGGTGGCGGCGG	Design primers
2069461	GCTTCG-CCTTCG-ACTTCG-GCTTCG-GCTTCG	Design primers
2154704	ACATAGTGCAACTTGGTGCAACTTGGTGCA	Design primers
2253299	CAGCCCGCCAGCGCGCCAGCCAGC	Design primers
2281720	TCATCATCGTCATGATCATCACCA	Design primers
2340620	CGGTGCGTTGCGGTCCGGAGCGTTG	Design primers
2399101	CCAAGAAGTCCACCAAGAAGACGACGAAGAAGGCCA	Design primers
2399146	CCACCAAGAAGGCCACTAAGAAGTCGACCAAAAAGGCTACCAAGAAGG	Design primers
2403507	GCATGACCATGGCGATCATGATCATGGAGAACATGAGCATGGCGA	Design primers
2437403	GCGCCTTCGGCTGCGGCTTCGACTGGGCCTTTGGCT	Design primers
2459609	TGGCCGTGGGCGCGGCCGTGGTCG	Design primers
2496078	CGACAACGC-CGACAACGC-TGACAACGC	Design primers
2520047	GGCTCAGGTTCCTCGGCGAGCGCGGGTTCCTCGGCGAGCGCGGGTTCCTCGGCG	Design primers
2553517	GC-GC-GC-GC-GA-GC-GC-GC-GG-GC-GC-GC	Design primers
2587117	CCTCATCGTCGGGCTCATCCTCGGCCTCTTTGTCGG	Design primers
2705516	GCAAAGTTGTTTCAGAGTTGTTTCAGAGTTGTT	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

167506

TGCGACGAGCGTCGACGAGCTGCGCCAAGC