Microsatellites /Tandem Repeats database

Genome: Sulfolobus islandicus L.S.2.15

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
100925TTTTACCATTTTTCCATTTGACCADesign primers
157005GGTGGAAGAAGATATGGAAGAAGAGGCGGAAGAAGADesign primers
227184AATAAAATTAAAAATATAAGTAAADesign primers
262942TTTTTATTTTAATTTTTGTTTTAADesign primers
395233TTC-TTC-TTC-ATC-CTC-TTC-TTC-ATCDesign primers
434280ACT-ACA-ACA-AGT-ACA-ACA-ACT-ACA-ACADesign primers
544505TTTAATAAAAATTATTAAAATTTTATAAAADesign primers
754031CTACTAATACTACCACTACTCCTADesign primers
773195TGAAAGGGTAAGAATGGGTAAGAAATGGTADesign primers
821337GCTAGGACTAGGGATAGGGCTAGGDesign primers
864358AGTGATTAATAGTCATTAAAAGTGACTATTDesign primers
899200TAGAAGTAACTAAAAATAACTAGTAGTTACDesign primers
924364ATAATTAAAGATATATAAAGATTATTAATGDesign primers
1128135CTCAAGCTCAAACTCAGGGTCAAGDesign primers
1164138ATAAAATAAGACAAAATAACATTAADesign primers
1192647CACCTATTAACAACTATTTACACCATTTAADesign primers
1223786TTTTAAAAATATTTATAAATTCTTATAAATDesign primers
1234326TATTACTATTGCTACTACTATTCCTATTATDesign primers
1274983ATATCTCTTAATATTGCTTAATATGCCTTADesign primers
1360501GGTTCCGGGGATTCCGGGGATTCCGGGDesign primers
1627179TTATATTTAATTTTATTTCATTATATGTTADesign primers
1727250AATAGAATTAGAAAGAGAAGTAGADesign primers
1829915AAATAATGGAAATATTGGAAATAATGADesign primers
1868107ATCTAATA-ATCTAATA-ATATAATADesign primers
1895901AAGAAGAGGAAGAAGAAGAAGAGGDesign primers
1953256CTTAAATCTTCTTCAGTCTTCTTTAACCTTDesign primers
1986022AAAGAAATTAAATGGAATTATAAGAAATTCDesign primers
2490134CTTCTTCTTTTTCTTCTCCTCCTTDesign primers
2636792AAGAGG-AAGAGG-TAGAGG-AGGAGGDesign primers
2636834TTCCTTTTTTCTTTTTTTCCTTTCDesign primers
2679812TATTTTTATTTCCATTTTTATTATDesign primers
2707832TAAAAG-TAAAAG-TAAACG-AAAAAGDesign primers

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