This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
Position | Sequence | |
250701 | AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT | Design primers |
621565 | TGGTTTAGGCTCAGGCTTAGGCAT-TGGTTTAGGCTCAGGCTTAGGCAT-TGGTTTAGGCTCAGGCTTAGGCAT-TGGTTTAGGCTCAGGCTTAGGCAT-TGGTTTAGGCTCAGGCTTAGGCAT | Design primers |
621719 | TTAGGCTGAGGTTCCGGC-TTAGGCTGAGGTTCCGGC-TTAGGCTGAGGTTCCGGC-TTAGGCTGAGGTTCCGGC | Design primers |
621809 | TTAGGCTGAGGTTCCGGC-TTAGGCTGAGGTTCCGGC-TTAGGCTGAGGTTCCGGC | Design primers |
1271458 | TGGCTTAGGCAT-TGGCTTAGGCAT-TGGCTTAGGCAT | Design primers |
1271495 | GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATT | Design primers |
1271735 | GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTA | Design primers |
1503592 | CTTCCATG-CTTCCATG-CTTCCATG-CTTCCATG-CTTCCATG-CTTCCATG-CTTCCATG-CTTCCATG | Design primers |
1550118 | AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA | Design primers |
1674504 | AACCTGAGCCTAAGCCAG-AACCTGAGCCTAAGCCAG-AACCTGAGCCTAAGCCAG | Design primers |
1830801 | CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG | Design primers |
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