Microsatellites /Tandem Repeats database

Genome: Bacillus cereus G9842

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
86981CTCGTGTTTT-TTCGTGTTTT-TTCGTGTTTTDesign primers
190897ATATAACTAATTATAACTAATTATAACTAAATATAACTAGDesign primers
426864TAGAGCCATTGCCAC-CAGAGCCATTGCCAC-CAGAGCCATTGCCAC-CAGAGCCATTGCCAC-CAGAGCCATTGCCAC-CAGAGCCATTGCCAC-CAGAGCCATTGCCACDesign primers
426970AGAACCATTGCCACC-AGAGCCATTGCCACC-AGAGCCATTGCCACC-AGAGCCATTGCCACC-AGAGCCATTGCCACC-AGAACCATTGCCACCDesign primers
427409CCACTGCCGCCAGAA-CCACTGCCGCCAGAA-CCATTGCCGCCAGAADesign primers
860146GAAAAACCAGGTGAAGGAACA-GAAAAACCAGGTGAAGGAACA-GAAAAGCCGGGTGAAGGAACA-GAGAAGCCAGGTGAAGGAACA-GAGAAGCCAGGTGAAGGAACA-GAGAAGCCAGGTGAAGGAACA-GAAAAGCCGGGTGAAGGAACA-GAAAAGCCAGATGAAGGAACADesign primers
1045484AACACCAGATCCAGAAAAGCCTGG-AACACCAGATCCAGAGAAACCTGG-AACACCAGATCCAGAGAAACCTGG-AACACCAAATCCAGAAAAACCTGG-AACACCAGATCCAGAGAAACCTGGDesign primers
1173495GTAGCCCCA-GTAGCCCCA-GTAGCCCCA-GTAGCCCCADesign primers
1181973AACAAGAAC-AACAAGAAC-AACAAGAAC-AACAAGAACDesign primers
1233205GAAGAACAAAAGAAAGTA-GAAGAACAAAAGAAAGTA-GAAGAACAGAAGAAAGTA-GAAGAACAGAAGAAAGTADesign primers
1563935AAACAAAAAGAAGTAGAACAAAAAGAAGTAAAACAACAAGAAGTADesign primers
1654508TATTA-AATTA-TATTT-AATTA-AATTA-AATTADesign primers
1834412AATAAC-AATAAC-AATAAC-AATAAC-AATAACDesign primers
2259135ACCAGTACTTCCGGTAGGCCCAGTACTTCCGGTAGGTCCAGTACTTCCGGTAGGDesign primers
2259633AAACGGGACCGACCGGAA-TAACGGGACCGACCGGAA-TAACGGGACCGACCGGAADesign primers
2261391GGAGCAACA-GGAGCAACA-GGAGCAACADesign primers
2261467CAACAGGAGCAACAGGCT-TAACAGGAGCAACAGGCT-TAACAGGAGCAACAGGCTDesign primers
2261557CAACAGGTC-CAACAGGTC-CAACAGGTCDesign primers
2261585AACAGGAGC-AACAGGAGC-AACAGGAGC-AACAGGAGCDesign primers
2344703CTTTATCTTAT-CTTTATCTTAT-CTTTACCTTATDesign primers
2975254AGTTA-AGTTA-AGTTA-AGTTA-AGTTADesign primers
3226081TGGTGGTACTGG-TGGTGGTACTGG-TGGTGGCACTGGDesign primers
3722471TCTTTCTTTGGTTCTTCTTTCTTTAGTTCTTCTTTCTTTGGCTCTTCTTTCTTTGGCTCTDesign primers
4023028ATATTTTTTGAACATTTTTTGAATATTTATTGADesign primers
4100239TTGTGGTAT-TTGTGGTAT-TTGTGGTAT-TTGTGGTATDesign primers
4186028AGAAAATGA-AGAAAATGA-AGAAAATGADesign primers
4239754GCAGCAATATCAACAGCAATATCAGCAGCAATACCADesign primers
4476652TTATTTCCACCTTGGTTG-TTGTTTCCACCTTGGTTG-TTGTTTCCACCTTGGTTG-TTGTTTCCACCTTGGTTGDesign primers
4476725CGTTTCCACCTTGGTTGT-CGTTTCCGCCTTGGTTGT-CGTTTCCGCCTTGGTTGT-CGTTTCCGCCTTGGTTGTDesign primers
4477275GTTTCCACCTTGGTTGTTGTTTCCGCCTTGGTTGTTATTTCCACCTTGGTTGTTDesign primers
4477757CATCTGGTTTTTCTA-CTTCTGGTTTTTCTA-CTTCTGGTTTTTCTA-CTTCTGGTTTTTCTA-CTTCTGGTTTTTCTA-CTTCTGGTTTTTCTADesign primers
4658465TGACCGTGG-TGACCTTGG-TGACCTTGG-TGACCTTGG-TGACCTTGG-TGACCTTGG-TGACCTTGG-TGACCTTGG-TGACCTTGG-TGACCTTGGDesign primers
4658579TGATGGCCT-TGATGACCT-TGATGGCCT-TGATGGCCT-TGATGGCCT-TGATGGCCT-TGATGGCCT-TGATGGCCT-TGATGGCCT-TGATGGCCTDesign primers
4843417TACCTTTCTCTG-TATCTTTCTCTG-TATCTTTCTCTG-TATCTTTCTCTG-TATCTTTCTCTGDesign primers
5034663ATAGAC-ATAGAC-ATAGAC-ATAGACDesign primers
5056138TCTTTTTTAGGTTCTTCCTTTTTAGGTTCTTCTTTTTTAGGCTCTDesign primers

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