This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 220922 | ACGGCGGCG-ACGGCGGCG-ACGGCGGCG-ACGGCGGCG | Design primers |
| 686372 | CCCTGCC-CCCTGCC-CCCTGCC-CCCTGCC | Design primers |
| 1325109 | GCCAAGCCCTGCCATGCCCTGCCATGCCCT | Design primers |
| 1585884 | CCGAGGACGCCCCGATGACGCCCCGATGACGCC | Design primers |
| 2251493 | GGCTGG-GGCTGG-GGCTGG-GGCTGG | Design primers |
| 2272815 | GACGCTTGCCTCGGCGCTTGCCTCGACGATTGCCTC | Design primers |
| 2318073 | GCC-GCC-GCC-GCC-GCC-CCC-GCC-GCC-GCC-GCC-GCC-GCC | Design primers |
| 2742398 | CGGCCACGGCGGGCAATCGCGGCACGGCCACGGCGGGCGATAGCGGCACGGCCACGGCGGGCGATAGCGGCACGGCCACGGCGGGCAATCGCGGCACGGCCACGGCGGGCATTCGCGGCACGGCCACGGCGGGCAATCGCGGCGCGGCCACGGCGGGCGATGGCGGCACGGCCACGGCGGGCAATCGCGGCACGGCCACGGCGGGCGATAGCGGCA | Design primers |
| 2742657 | CGGCACGGCCACGGCGGGCGATAGCGGCACGGCCACGGCGGGCAATCGCGGCACGGCCACGGCGGGCAATGG | Design primers |
| 2742750 | TCGCGGCACGGCCACGGCGGGCGATAGCGGCACGGCCACGGCGGGCAATCGCGGCGCGGCCACGGCGGGCGATAGCGGCACGGCCACGGCGGGCTATGGCGGCACGGCCACGGCGGGCGATAGCGGCACGGCCACGGCGGGCAATCGCGGCACGGCCACGGCGGGCGA | Design primers |
| 2742942 | TCGCGGCACGGCCACGGCGGGCGATAGCGGCACGGCCACGGCGGGCAATCGCGGCGCGGCCACGGCGGGCGATAGCGGCACGGCCACGGCGGGCTATGGCGGCACGGCCACGGCGGGCGATAGCGGCACGGCCACGGCGGGCAATCGCGGCACGGCCACGGCGGGCGATAGCGGCACGGCCACGGCGGGCTATGGCGGCACGGCCACGGCGGGCGATGGCGGCACGGCCACGGCGGGCGA | Design primers |
| 2787857 | GAGCCGCCGTCTGGGCCGCCGTCTGGGCCGCCGTCT | Design primers |
| 3020457 | TGGCG-GGGCG-GGGCG-GGGCG-GGGCG-GGGCG | Design primers |
| 3184372 | ACCGGCGGTGCAGGG-GCCGGCGGTGCAGGG-GCCGGCGGTGCAGGG | Design primers |
| 3283679 | CACCAGCAC-CACCAGCAC-CACCAGCAC | Design primers |
| 3356424 | CCGGGGAAGGGCCCAGGGAAGGGCCCAGGGAAGGGC | Design primers |
| 3439462 | GGCGCCCC-GGCGCCCC-GGCGCCCC | Design primers |
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