Microsatellites /Tandem Repeats database

Genome: Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
93CACCACCACCATTACCACCATCACDesign primers
68364TTT-TAA-TTA-ATT-TAA-TTA-TTT-TTA-TTADesign primers
100067GCGCTG-GGGCTG-GGGCTG-GGGCTGDesign primers
246704CGGCGGTAACGGCGGCAACGGCGGTCADesign primers
379682TGCTATCGCTATTGCTATTGCGATDesign primers
504174GCGAAAGAGAAAGCGGAAGCGGAADesign primers
620447AGCGACCC-TCTTACCC-TCTTACCC-TCTTACCC-TCTTACCC-TCTTACCC-TCTTACCC-TCTTACCC-TCTTACCC-TCTTACCC-TCTTACCC-TCTTACCCDesign primers
653550TGGTGGTGGTCGTGGTGCTGGCGGDesign primers
757564ATCGCC-AGCCCC-AGCCCC-AGCCCC-AGCCCC-AGCCCCDesign primers
904741TTGCGG-CTGCGG-CTGCGG-TTGCGGDesign primers
972791TCAGCAGCC-GCAGCAGCC-GCAGCAGCCDesign primers
1048521CCGGAG-CCGGTG-CCGGTG-CCGGAGDesign primers
1200290AGCAGTGCCAGCACTGCCAGCACTGCCDesign primers
1487545TTATGCTGGATTATCCTGGCGTATGCGGGADesign primers
1857657TAGGAGTGTTAATGAGTGTTAATGAGTGTTDesign primers
2115596TTGGCGAT-GTGGCGAT-GTGGCGATDesign primers
2333076CGTCAGCGG-GGTCAGCGG-GGTCAGCGGDesign primers
2336455GCAGCGCCAGCAGCACCAGCGGCGCCADesign primers
2495659TGATTTG-TTGGTAG-TTGGTAG-TTGGTAG-TTGGTAG-TTGGTAG-TTGGTAG-TTGGTAG-TTGGTAGDesign primers
2561095ACGCCGTCGCACGCCGCCTCACGCAGTTGCDesign primers
2925760TATGGGTTTATGTGAGTTTATAAGGGTTTTDesign primers
3014505GTTGTGATGTTGTGTTGTTGTGTTDesign primers
3091283CCGGCGCTGGCGCCGGTGCTGGCGDesign primers
3329479TCGCTT-TCGCTT-TCTCTT-CCGCTTDesign primers
3330246TCGCCGCCGTCGCCGCCATCACCGCCGDesign primers
3811162CGCCGCTGACCCCGCTGACCCCGCTGADesign primers
3842077GCGCCCGGCGCGCCAGGCGCGCACGGCDesign primers
3936783TTTCTTGTTCTTTTTGTTGTTCTTDesign primers
4380420AGGCCGGATAAGCCGGATAAGCCGGATDesign primers
4409910GGTGGCATGGGTGGTATGGGTGGTATGGGCGGCATGDesign primers

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