Microsatellites /Tandem Repeats database

Genome: Ralstonia pickettii 12J

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
107391GTTTTTG-GTTTTTG-GTTTTTG-GTTTTTGDesign primers
136702TTGCTTG-TTGCTTG-TTGCTTG-TTGCTTG-TTGCTTGDesign primers
315928GCGATGTCGAAGGAC-GCGATGTCGAAGGAC-GCGATGTCGAAGGAC-GCGATGTCGAAGGAC-GCGATGTCGAAGGAC-GCGATGTCGAAGGAC-GCGATGTCGAAGGACDesign primers
316094CGATGAAGAAGGACG-CGATGAAGAAGGACG-CGATGAAGAAGGACG-CGATGAAGAAGGACGDesign primers
451357GGCCAA-GGCCAA-GGCCAA-GGCCAADesign primers
495532GATCACCAG-GATCACCAG-GATCACCAGDesign primers
503867GCCATCGCG-GCCATCGCG-GCCATCGCG-GCCATCGCGDesign primers
814332CCGGAGCAG-CCGGAGCAG-CCGGAGCAGDesign primers
1200746TTGCCG-TTGCCG-TTGCCG-TTGCCGDesign primers
1648734TGCCGG-TGCCGG-TGCCGG-TGCCGGDesign primers
1928894TCCATGCCCTGCATCGAGCCGTGG-TCCATGCCCTGCATCGAGCCGTGG-TCCATGCCCTGCATCGAGCCGTGGDesign primers
1928967CCATGCCCTGCATCGAGCCCTGAT-CCATGCCCTGCATCGAGCCCTGAT-CCATGCCCTGCATCGAGCCCTGATDesign primers
1929110TCCATGCCCTGCATCGAGCCCTGA-TCCATGCCCTGCATCGAGCCCTGA-TCCATGCCCTGCATCGAGCCCTGADesign primers
1929992CATGCCAGA-CATGCCAGA-CATGCCAGA-CATGCCAGA-CATGCCAGADesign primers
2268748CCGGCA-CCGGCA-CCGGCA-CCGGCA-CCGGCA-CCGGCADesign primers
2435996CGTCTA-CGTCTA-CGTCTA-CGTCTA-CGTCTA-CGTCTA-CGTCTA-CGTCTA-CGTCTA-CGTCTA-CGTCTA-CGTCTADesign primers
3079918CGAACCCGG-CGAACCCGG-CGAACCCGGDesign primers
3562951AAACCA-AAACCA-AAACCA-AAACCA-AAACCADesign primers
3581467GCCACATCG-GCCACATCG-GCCACATCGDesign primers

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