Microsatellites /Tandem Repeats database

Genome: Opitutus terrae PB90-1

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
982685GCCCTCCCT-GCCCTCCCT-GCCCTCCCTDesign primers
1177915TCGTTCTCTTTCTCGTTCTCGTTCTCGTTCTCTCTCDesign primers
1177996GAGAAC-GAGAAC-GAGAAC-GAGAAC-GAGAACDesign primers
1351291CGGTGAGG-CGGTGAGG-CGGTGAGGDesign primers
1354849GACGGTGA-GACGGTGA-GACGGTGADesign primers
1354902GAAGCGGT-GAAGCGGT-GAAGCGGTDesign primers
1699233TCTGTGTTTATCTGTGTTCATCTGTGGTTADesign primers
2121843TCGGAGT-TCGGAGT-TCGGAGT-TCGGAGTDesign primers
2318518GAGAAATGAGAAATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATGAGAGATDesign primers
2598849CTCTCAA-CTCTCAA-CTCTCAA-CTCTCAADesign primers
2802083GCGGATTCGACAGGCTCACCGCAGGCGGATTCGACAGGCTCACCACATGCGGATTCGACAAGCTCACCGCGGDesign primers
4487876TTCCTCCTACGCCAAGCCTTCCTCCTACGCCAAGGCTTCCTCCTACGCCAAGGCDesign primers
4511477GTCGATCCGAGGACGATCCGAGTTCGATCCGAGDesign primers
5117792TCCATCTGTGTTCATCTGTGTCCATCTGTGDesign primers
5256908CTCGTT-CTCTTT-CTCGTT-CTCGTT-CTCATT-CTCTTT-CTCGTT-CTCGTTDesign primers
5374243TCCATCTGTGTTCATCTGTGTCCATCTGTGDesign primers

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