This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 20865 | TTTCTTTGG-ATTCTTTGG-ATTCTTTGG-ATTCTTTGG-ATTCTTTGG-ATTCTTTGG-ATTCTTTGG-ATTCTTTGG-ATTCTTTGG-ATTCTTTGG-ATTCTTTGG-ATTCTTTGG | Design primers |
| 142622 | AAAGATATAT-TAAGATATAT-TAAGATATAT | Design primers |
| 605187 | ATCCTA-AACCTA-AACCTA-AACCTA-AACCTA-AACCTA | Design primers |
| 726110 | GACTCAGACTCAGACAGTGATTCGGATTCTGACTCAGACAGTGATTCGGATTCTGACTCAGACAGTGATTCG | Design primers |
| 726183 | ATTCTGACTCAGACAGCGATTCGG-ATTCTGACTCAGACAGCGATTCGG-ATTCTGACTCAGACAGCGATTCGG | Design primers |
| 726269 | TCAGACTCTGACAGCGATTCGGAT-TCAGACTCTGACAGCGATTCGGAT-TCAGACTCTGACAGCGACTCAGAT | Design primers |
| 726614 | GACTCAGACTCAGACAGTGATTCG-GATTCTGACTCAGACAGTGATTCG-GATTCTGACTCAGACAGTGATTCG-GATTCTGACTCAGACAGTGATTCG-GATTCTGACTCAGACAGTGATTCG | Design primers |
| 726773 | TCAGACTCTGACAGCGATTCGGATTCAGACTCTGACAGTGATTCGGATTCAGACTCTGACAGCGACTCAGAT | Design primers |
| 726956 | GACTCAGACTCAGACAGTGATTCG-GATTCTGACTCAGACAGTGATTCG-GATTCTGACTCAGACAGTGATTCG-GATTCTGACTCAGACAGTGATTCG-GATTCTGACTCAGACAGTGATTCG-GATTCTGACTCAGACAGTGATTCG | Design primers |
| 727676 | GATTCTGACTCAGACAGCGATTCGGATTCTGACTCTGACAGTGATTCGGATTCAGACTCTGACAGCGATTCGGATTCTGACGCAGACAGTGATTCGGATTCTGACGCAGACAGTGATTCGGATTCTGACTCAGACAGCGATTCGGATTCAGACTCTGACAGCGATTCG | Design primers |
| 727855 | TGACTCTGACAGTGATTCGGATTCTGACTCAGACAGTGATTCGGATTCTGACTCAGACAGCGATTCGGATTC | Design primers |
| 728161 | CGATTCTGACTCAGACAGTGATTC-GGATTCTGACTCAGACAGTGATTC-GGATTCTGACTCAGACAGCGATTC | Design primers |
| 728558 | GATTCTGACTCAGACAGTGATTCGGATTCAGACTCTGACAGTGATTCGGATTCTGACTCTGACAGCGATTCGGATTCCGACTCTGACAGTGATTCG | Design primers |
| 758958 | AAGTT-AAATT-AAATT-AAATT-AAATT-AAATT | Design primers |
| 1234705 | AACCAAG-AACCAAG-AACCAAG-AACCAAG | Design primers |
| 1289296 | GG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN | Design primers |
| 1532137 | GGCTTTGGTGGTCAAGGTGGCTTCGGTGGTCAAGGTGGCTTCGGTGGTCAAGGT | Design primers |
| 2032291 | TGAGGT-TCAGGT-TCAGGT-TCAGGT-TCAGGT-TCAGGT | Design primers |
| 2143594 | GAATCAGAGTCACTGTCGCTATCAGAGTCTGAGTCACTGTCGCTATCAGAGTCTGAGTCACTGTCGCTATCA | Design primers |
| 2143996 | GAGTCACTGTCGCTATCAGAGTCTGAATCACTGTCACTATCAGAGTCTGAGTCACTGTCGCTATCAGAGTCTGAGTCACTGTCGCTATCTGAGTCT | Design primers |
| 2144214 | ATCAGAGTCGGAATCACTGTCGCTGTCAGAGTCTGAATCACTGTCGCTATCTGAGTCTGAATCACTGTCGCT | Design primers |
| 2144710 | GAATCACTGTCGCTGTCAGAGTCTGAATCACTGTCGCTATCTGAGTCTGAATCACTGTCGCTATCTGAGTCTGAATCACTGTCGCTATCAGAATCT | Design primers |
| 2145208 | GAGTCTGAATCACTGTCGCTATCAGAATCTGAGTCACTGTCGCTATCAGAGTCTGAGTCACTATCGCTATCA | Design primers |
| 2168982 | GCTA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA-CATA | Design primers |
| 2473852 | CGCCTG-CACCTG-CACCTG-CACCTG-CACCTG-CACCTG | Design primers |
| 2530831 | AATAACA-GAGAACA-GAGAACA-GAGAACA-GAGAACA-GAGAACA-GAGAACA-GAGAACA-GAGAACA-GAGAACA-GAGAACA-GAGAACA-GAGAACA-GAGAACA-GAGAACA | Design primers |
| 2593564 | GCGGTACAG-TCGGTACAG-TCGGTACAG-TCGGTACAG-TCGGTACAG-TCGGTACAG-TCGGTACAG-TCGGTACAG-TCGGTACAG-TCGGTACAG-TCGGTACAG-TCGGTACAG-TCGGTACAG-TCGGTACAG | Design primers |
| 3201336 | ACCGAGC-AGCGAGC-AGCGAGC-AGCGAGC-AGCGAGC-AGCGAGC-AGCGAGC-AGCGAGC | Design primers |
|
Please help us improve this resource by reporting problems, suggestions etc.