This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 20866 | TTCTTTGGA-TTCTTTGGA-TTCTTTGGA-TTCTTTGGA-TTCTTTGGA-TTCTTTGGA-TTCTTTGGA-TTCTTTGGA-TTCTTTGGA-TTCTTTGGA-TTCTTTGGA-TTCTTTGGA | Design primers |
| 605189 | CCTAAA-CCTAAA-CCTAAA-CCTAAA-CCTAAA | Design primers |
| 726116 | GACTCAGACAGTGATTCGGATTCT-GACTCAGACAGTGATTCGGATTCT-GACTCAGACAGTGATTCGGATTCT | Design primers |
| 726620 | GACTCAGACAGTGATTCGGATTCT-GACTCAGACAGTGATTCGGATTCT-GACTCAGACAGTGATTCGGATTCT-GACTCAGACAGTGATTCGGATTCT-GACTCAGACAGTGATTCGGATTCT | Design primers |
| 726962 | GACTCAGACAGTGATTCGGATTCT-GACTCAGACAGTGATTCGGATTCT-GACTCAGACAGTGATTCGGATTCT-GACTCAGACAGTGATTCGGATTCT-GACTCAGACAGTGATTCGGATTCT-GACTCAGACAGTGATTCGGATTCT | Design primers |
| 758961 | TTAAA-TTAAA-TTAAA-TTAAA-TTAAA-TTAAA | Design primers |
| 1234705 | AACCAAG-AACCAAG-AACCAAG-AACCAAG | Design primers |
| 1289298 | NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN | Design primers |
| 1532143 | GGTGGTCAAGGTGGCTTC-GGTGGTCAAGGTGGCTTC-GGTGGTCAAGGTGGCTTC | Design primers |
| 2032293 | AGGTTC-AGGTTC-AGGTTC-AGGTTC-AGGTTC-AGGTTC | Design primers |
| 2168984 | TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA-TACA | Design primers |
| 2473854 | CCTGCA-CCTGCA-CCTGCA-CCTGCA-CCTGCA-CCTGCA-CCTGCA | Design primers |
| 2530834 | AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG-AACAGAG | Design primers |
| 2593565 | CGGTACAGT-CGGTACAGT-CGGTACAGT-CGGTACAGT-CGGTACAGT-CGGTACAGT-CGGTACAGT-CGGTACAGT-CGGTACAGT-CGGTACAGT-CGGTACAGT-CGGTACAGT-CGGTACAGT-CGGTACAGT | Design primers |
| 3201338 | CGAGCAG-CGAGCAG-CGAGCAG-CGAGCAG-CGAGCAG-CGAGCAG-CGAGCAG-CGAGCAG | Design primers |
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