Microsatellites /Tandem Repeats database

Genome: Bacillus amyloliquefaciens FZB42

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
535306AGAAGCGAGAGCCAGAGCGGAAGAGGCAATAGCAAGAGCGGAAGAAGCAAGAGCCAGAGCAGCDesign primers
713428GGCGGCTAC-GGCGGCTAC-GGCGGCTTCDesign primers
765743ACTGGAGCTACAGGAGCTACAGGAGCTDesign primers
767196CAACAGGCC-CAACAGGCC-CAACAGGACDesign primers
767494GACAGGAGT-AACAGGAGT-AACAGGAGTDesign primers
768343TTCACCGGAGCAACGGGGTGCACCGGAGCAACGGGGCTGACCGGAGCAACAGGGDesign primers
768398TGACTGGAGCAACGGGATTTACTGGAGCAACGGGGTTTACCGGAGCAACGGGGTTTACCGGAGCAACGGGATTCACCGGAGCAACGGGCTDesign primers
842602AAAAAGTGAAAAAGAGAAAAACTGDesign primers
921618GCTGCTGCTGCTGCTGATTCTGCTGCTGTTDesign primers
1151613CTTCTTTTTCTTCTTTTTCTTCTCDesign primers
1230883TTATCTTTTTTTCTTTTTATCATTDesign primers
1306471TTCTTTATCTTTTTCCTTGTCTTTDesign primers
1321513GAAAACACTGCGATAACACTGTGAAAATGCTGCDesign primers
1360796AATAAAATAGTAAAATGATAAAATDesign primers
1649294AACAACAACAACAAAAACAAAAACDesign primers
1820539GCATTTTTTACATTTTTTGCATTTTCTDesign primers
1820678CCCATA-CCCATA-CCCATA-TCCATA-CCCATA-TCCATA-TCCATA-CTCATADesign primers
1830407GCAATGGCAGTGGGAATGGCAATTDesign primers
2047501ATATTTTGGTTATAATTTGATTACATTTTGATTDesign primers
2237745CAAATGCACAAATACACAAAAGCADesign primers
2263719TGTTTTTCTTTTTCTTTTCGTTTTDesign primers
2392802GTTTTTCTAGCATTTTCTAGGTTTTTCGACDesign primers
2609264GTGATGATGATGTGA-ACCATGATGATGTGA-ACCATGATGATGTGADesign primers
2776903GTTTCGCCTGTTTCGCATATTTCGCCTDesign primers
3088576TTATTATATAATGTTATATAACATTATATADesign primers
3624326GGGGAT-GGGGAT-GGGAAT-GGGAATDesign primers

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