This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 15825 | ATTT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT | Design primers |
| 44504 | ATTT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT | Design primers |
| 101306 | TTTGTTG-GTTGTTG-GTTGTTG-GTTGTTG-GTTGTTG-GTTGTTG | Design primers |
| 199852 | ATTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG | Design primers |
| 227147 | ATTTTCAGA-ATTTTCAGA-ATTTTCAGA | Design primers |
| 277513 | GTTTTTCTACCGCAC-TTTTTTCTACCGCAC-TTTTTTCTACCGCAC | Design primers |
| 316845 | CCGAAAATATCGCCAAAAATATCGCCGAACATATCG | Design primers |
| 471083 | AAT-AAT-AAT-AAT-AAT-AAT-AAT-AAT | Design primers |
| 741572 | TATTTAATTTTATTAAATTTTATTAAATTT | Design primers |
| 756467 | TTACAGGAA-TTACAGGAA-TTACAGGAA | Design primers |
| 767980 | CATG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG | Design primers |
| 858174 | CTTT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT | Design primers |
| 861729 | GGCTTA-GGCTTA-GGCTTA-GGCTTA-GGCTTA | Design primers |
| 938097 | ATTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG | Design primers |
| 967591 | TAACCA-TAACCA-TAACCA-TAACCA-TAACCA | Design primers |
| 1001218 | CGAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA | Design primers |
| 1074003 | CTCAAATTTAGGCTCGAATTTAGGTTCAAATTTAGG | Design primers |
| 1097027 | AGTT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT | Design primers |
| 1173882 | TTTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT | Design primers |
| 1204389 | TCTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT | Design primers |
| 1259124 | TTTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT | Design primers |
| 1349255 | TGGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC | Design primers |
| 1447448 | CTTT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT | Design primers |
| 1453481 | CCTTGTTTT-TCTTGTTTT-TCTTGTTTT-TCTTGTTTT-TCTTGTTTT-TCTTGTTTT | Design primers |
| 1724753 | TGGAGATTTTTAGAGATTTTTAGAGATTTT | Design primers |
| 1846054 | TTTAGCCCACCATTTTTATTCA-TTTAGCCCACCATTTTTATTCA-TTTAGCCCACCGTTTTTATCCA | Design primers |
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