Microsatellites /Tandem Repeats database

Genome: Synechococcus sp. WH 7803

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
61394CGGTGGCGGTGTCGATGGCGCTGGDesign primers
68914AGCAGCTGCAGCAGCAGGAGCAGGDesign primers
76904GGTGGCCATGGTGGTGGCCGCAATGGTGGTGGTGGCGGTGGTGGCDesign primers
191910GGGTGC-AGGTGC-AGGTGC-AGGTGCDesign primers
280638CAGCGGAAGCGGCTGCGGCTGCGGDesign primers
281830TCGTCATCGTTGCTGTCGTCGTCTTCGCTGTCGTTGTCGTCGCTGDesign primers
360600TCACTGCTTCGCTCACGGCCTCGCTCACTGCTTCGCDesign primers
413499CGGTTCAGTGGCTGGTTCTGTGGCTGGTTCTGTGGCDesign primers
439539GCGGCGGTCACCGCGACGGCCACCGCGACGGTCTCCDesign primers
511380CATGCAGACATGGACCAATCAGAGATGGACCATTCAGCCATCGACDesign primers
681326CTGCCGCTCCCGCTTCAGCAGCTCCCGCCTCAGCAGCTCCCGCTGDesign primers
810469GTCACCATCACGGAGGTGGTCACCATCACGGAGGCAGCCACCATCACGGCGGGGDesign primers
886451TGGCGGTCA-TGGCGGTCA-TGGTGGTCADesign primers
1040023GGCCATCACGATCAC-AGCCATCACGATCAC-AGCCATCACGATCAC-AGCCATCACGACCAC-GGCCATCACGATCACDesign primers
1225158GCAGCCGGTTGTTCAGCAGAAGGCTGTTCAGCAGCAGATTGTTCADesign primers
1292856GGGACTGCGGGACTGGGGGCCTGCDesign primers
1363773CTGATCAAAAGCCTGGCTTGATCAAAACTCTGGCTTGATCAAAACCCTGACDesign primers
1390220GGCTACGGCGGTGGCGGCGGTGGCGGTGGCGGTTACGACGGTGGTDesign primers
1465516AGCTCCGGCTCCAGTTCCAGCTCCGGCTCCDesign primers
1536603CAACCCATCGAACCCATCAAACCCATCDesign primers
1536960CAACCCATCGAACCCATCAAACCCATCDesign primers
1537317CAACCCATCGAACCCATCAAACCCATCDesign primers
1537674CAACCCATCGAACCCATCAAACCCATCDesign primers
1550484TCCAGCCCCAGCTCCTGCTGCAGCDesign primers
1553824CCGCGGTGGTGGGTCCAGAGGTGGTGGGTCCAGAGGTGGTGGCTCDesign primers
1580302GGCATGCCGGGCATCCCGGGCATGCCADesign primers
1657435CACGACCACAACCACAACCATGACCACGATDesign primers
1708031CATGGGCGGCATGGGTGGAATGGGCGGAATGGGCGGDesign primers
1723742TTTCGCCGCTGGTTTTTTGGCGGCAGGTTTCTTCGCCGCCGGCTTDesign primers
1808404GGTGGTGGCGGTGGCGGTGGTGGCDesign primers
1899328CATATCCATATCCATGCCCATATCCATGTCCATATCCATATCCATGCCCATATCCATGTCDesign primers
1930102GCCCGTACGCCCGAACGCACGTACDesign primers
1935689TGGTGCAGTTGGGGTGCAGTTCTGGTGAATTTGDesign primers
1950112GCGCTACGAACCCCAAGAGCGTTACCAACCCCAAGAGCGCTACCAGCCTCAAGADesign primers
2223013GCATGCGCGTGCGCATGGGCATTCDesign primers

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