Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Salinispora tropica CNB-440

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
2743	CCGTGGATAACCGGTGGATAACCGGTGGACAAC	Design primers
40732	CTCGG-CTCGG-CCCGG-CTCCG-CTCTG	Design primers
41033	CGGCGCCGGCCCCGGCGGCGGTGC	Design primers
41671	ACGCGAACGTCCGCCACACCAACGTCCCCCACGCGAACGTCCGCCACGCCAACGTCGGCC	Design primers
51655	CCCCAG-CCCCAG-CCCGAG-CCCGAG	Design primers
65936	CCAGCGGC-TCAGCGGC-TCAGCGGC	Design primers
73272	CGGCGGCGGCGATGGCGGCGGCGT	Design primers
82014	CCGGTGTCCCCCGTGTCCCCGCTGTCC	Design primers
113527	GTCGACCGGTGGTGGTGGAGCGGCGGCCGGTGGCGGTGGCGCGGCGGCCGGTGGTGGTGGCGC	Design primers
113595	AGTCGACCGGTGGTGGTGGAGCGGCGGCCGGTGGTGGTGGAGCGGCGGCCGGTGGTGGTGGCG	Design primers
132927	TCGGGTTCCTCGGGGCAGTCTGGCTCCCCGGGGCAGTCTGGCTCCTCGGGGCAC	Design primers
141802	CGGGGGCGGTCCTGCGGGTGGCGGTCCTGGCGGTGGTGGGCCTGC	Design primers
172805	GTAGTCGTCGTCGAAGTCGTGGTC	Design primers
221867	TGCCCCTGGTGCCGCTGGTGACCCTGG	Design primers
270897	TGG-TGG-TGG-CGG-TGG-TGG-TGG-CGG	Design primers
319389	CCCGCCCGGTTATCCGCCACCGCCCGGTTATCCGCCGCCGCCTGGTCATCCGCC	Design primers
336279	TGCTGG-GGCTGG-GGCTGG-TGCTGG	Design primers
337221	TGCTCCTGGTCCTGCTCCTGCTCC	Design primers
362838	CGGCGGCGGCTGCGGTGGCGGCGA	Design primers
380143	CGACAC-CGACAC-TGACAC-CGTCAC	Design primers
426166	GCCGTGGCGGTGGCCGTGGCGGTG	Design primers
460992	CCGACCGCCCGTCCGCCCCACCGC	Design primers
682524	TTTCCCGTTCCCGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCGTTGCCGTTGCC	Design primers
712946	GCCGAAGCCGAGTCCGAAGCCGAT	Design primers
715916	TCGACCTCGCCGCCGTCGACCTCTCCGGCAAGGACCGCGCCGCCG	Design primers
721171	CGACGG-CGACGG-CGTCGG-TGACGG	Design primers
744195	GGCCAGAGCCAGGGCCTGGACCAG	Design primers
790500	GGCGACGAGGCCCGGTCAGACTCCGAGGCCCGGTCAGACTCCGAGGCCCGGTCA	Design primers
801250	CCGGTGTTGCCGGCGTTGCCGGCGTTG	Design primers
801722	TCCAGCCGC-TCCAGCCGC-TCCGGCCGC	Design primers
810236	TGCTGCTGCGCCCACTGTTGCTGTTGTTCCCACTGTTGCTGTTGTTCCCACTGT	Design primers
815450	GCCGG-GCCGG-GCCAG-GCTGG-GCGGG	Design primers
822335	GGCCACGACCACGACCACGGCCACGGCCGC	Design primers
858904	GCCACCGCCCCCGCCTCCGCCAGC	Design primers
862686	TGGGGC-AGGGGC-AGGGGC-AGGGGC-AGGGGC	Design primers
912383	GCTGCGCTGCCTGCTCCGCTGCCTGCTCCGCCGCCT	Design primers
930133	CCTCACCCCCTCGCCCCCTCACCG	Design primers
930207	TGGTGCC-CGCTGCC-CGCTGCC-CGCTGCC-CGCTGCC-CGCTGCC	Design primers
930250	GCTGTCCGCTGCCCGCTGTCCGCTGCCC	Design primers
933651	CGAGGTCGAGGCCGCGGTCGAGGC	Design primers
971645	GCGGCGGAGGCGGCTGCGGCTGCG	Design primers
977954	CGGCCCGACAGAGACCAG-CGGCCCGACAGAGACCAG-CGGCCCGGGGGAGACCAG	Design primers
1004098	GCCCCACCGACCACGCCGGAGAACTCACCGACCACGCCGGAGAACTCACCGGCCACGCCGGAG	Design primers
1006675	GCCGCCGCCACCGCCGCGGCCGCG	Design primers
1010589	GCTGCTGGTGGCGCCGGTGGTGGCGCTGCTGCCGGC	Design primers
1054243	GCGGTCGGGTCGGGTCGGGTGCGATCGCGT	Design primers
1081400	GGCGGCGGTGGCGTCGGCGGCGGT	Design primers
1094869	GGCCCGGCCGGGCCCGGTCCGGCCC	Design primers
1127849	GATTTCCCTGACCCGGCTTTCCTCGACCCGGCTTTCCCTGACCGG	Design primers
1135762	GTCCGC-GTCCAC-GTCCAC-GTCCGC	Design primers
1199164	ACACCTGCACCTACACCACCACCTACACCT	Design primers
1200044	CAC-CAC-CAC-CAC-CAG-CAC-CAC-CAC-CGC-CAC	Design primers
1206940	TCGGCGTGCGGCGACGTGCGTCGGCGTCTG	Design primers
1234539	GCCGGGCCGTTGGCGTC-GCCGGGCCGTTGGCGTC-GCCGGGCCGTCGGCGTC-GCCGGGCCGTCGGCGTC	Design primers
1320591	CCCACCGACCCGACCGACCCCACCGAT	Design primers
1336719	CCACCCCCCACCCACCCCCACCCACCCCCA	Design primers
1344610	GGTGACGGTGGCGGTGAGCGTGAC	Design primers
1396411	CGGCCGAGGCCGCGGCCGAGGCCG	Design primers
1422804	ACGAAGACCACCGCCGCC-AAGAAGACAACCGCTGCC-AAGAAGACAACCGCTGCC-AAGAAGACCACGGCTGCC	Design primers
1427086	ACCGCCAACGCCAGCGCCAACGCC	Design primers
1475211	CCGGTGGGCCCGGTAGGCCCGGTAGGC	Design primers
1479979	TGGGCCGCGCCGACCGAGGAGCGCGCCGCGCGGACCGATGAGCGGGCTGCGCCGACCGACGAG	Design primers
1485805	CCGGCTGTCGGCCAGCCCCGGGGC-CCGACGGTCGGTCAGCCCCGGGGC-CCGACGGCCGGTCAGCCCCGGGGC-CCGACGGCCGGTCAGCCCCGGGGC-CCGACGGCCGGTCAGCCCCGGGGC-CCGACGGCCGGTCAGCCCCGGGGC	Design primers
1487029	AGCCGAAGAAGAGCGACGAGCAGCCGGCGAAGAGCGACGAGCTGCCGGTGAAGACCGACGAGCAGCCGACGAAGAGCGACGAGC	Design primers
1492819	CTGCCCGACCGGATGGGT-CCGCCGGATCGGATGGGT-CCGCCGGATCGGATGGGT-CCGCCGGATCGGATGGGT-CCGCCGGATCGGATGGGT-CCGCCGGATCGGATGGGT-CCGCCGGATCGGATGGGT-CCGCCGGATCGGATGGGT-CCGCCGGATCGGATGGGT-CCGCCGGATCGGATGGGT-CCGCCGGATCGGATGGGT	Design primers
1513763	CGATGACGGTGACGGTGACGACGA	Design primers
1538284	CGCCGA-CCCCGA-CCCCGA-CTCCGA	Design primers
1538954	CGGTGG-CGGTGG-CGGCGG-CGGTGG	Design primers
1538986	GCG-GCG-GCG-GTG-GTG-GCG-GCG-GCG	Design primers
1539029	CGG-CGG-CGG-TGG-CGG-TGG-TGG-CGG-CGG-CGG	Design primers
1589232	CGG-CGG-CGG-TGG-CGG-TGG-CGG-TGG-CGG-TGG	Design primers
1604933	GAGCGGGACCGGGAGCTGGAGCAG	Design primers
1620197	TGCGTCCGCGTCCACGTCTGCGCCCGCGTCCGTGTCTGCGCCCGCGTCCACGTC	Design primers
1620262	CCGCGTCCACGTCTGCGTCTGCGT	Design primers
1620298	CC-GT-GT-CT-GC-GG-CC-GC-GC-CC-AC-GT-CT-GC-GC-CC-GC-GC-CC-AC-GT-CT-GC-GC-CC-GC-GC	Design primers
1620353	CACGCCCGCGCCCGCGTCCACGTC-TGCGCCCGCGCCCGCGTCCACGTC-TGCGCCCGCGCCCGCGTCCACGTC	Design primers
1620444	GCGTCCGTGTCTGCGGCCGCGTCCACGTCTGCGGCCGCGTCCACGTCTGCGCCC	Design primers
1620499	CGTCCACGTCTGCGCCTGCGCCCG-CGTCCACGTCTGCGCCTGCGCCCG-CGTCCACGTCTGCGTCTGCGTCTA	Design primers
1620580	CC-GT-GT-CT-GC-GG-CC-GC-GC-CC-AC-GT-CT-GC-GC-CC-GC-GC-CC-AC-GT-CT-GC-GC-CC-GC-GC	Design primers
1620635	CACGCCCGCGCCCGCGTCCACGTC-TGCGCCCGCGCCCGCGTCCACGTC-TGCGCCCGCGCCCGCGTCCACGTC	Design primers
1620726	GCGTCCGTGTCTGCGGCC-GCGTCCACGTCTGCGCCC-GCGTCCACGTCTGCGCCC-GCGTCCACGTCTGCGCCC	Design primers
1620799	CGTCCACGTCTGCGCCTGCGCCCG-CGTCCACGTCTGCGCCTGCGCCCG-CGTCCACGTCTGCGTCTGCGTCTA	Design primers
1622020	CTGACGCAGACGCGGACGCGGACG	Design primers
1622045	AGACGCGGGCGTAGACGTAGAAGCGGGCGTAGAAGCGGGCGCGGACGTAGACGT	Design primers
1622218	CTACGTCCGCTTCTACATCCGCGTCCGCTTCTACATCCGCGTCCGCTTCTACGTCCGCGTCCGCTTCTACGT	Design primers
1622304	ACGCCCGCTTCTACGTCTACGCCCGCGTCTACGCCCGCGTCCGCGTCTACGTCT	Design primers
1622527	CGTCCGCGCCTACGTCTACGTCTACGTCTACGTCTACGTCCGCGTCTACGTCCGCGTCCGCGCCTACGTCTA	Design primers
1622631	TCTACG-CCCGCG-CCCGCG-CCCGCG-CCCGCG-CCCGCG-TCCGCG-CCCGCG-CCCGCG	Design primers
1622686	CCGCGCCCGCGTCTACGT-CCGCGCCCGCGTCTACGT-CCGCGCCCGCGTCTACGT	Design primers
1622741	CGCGTCTACGCC-CGCGTCTACGCC-CGCGTCTACGCC	Design primers
1622778	GCGTCCGCGTCTACGTCCGCGTCCGCGTCCGCGTCT	Design primers
1622911	CGCCTA-CGTCTA-CGTCTA-CGTCTA	Design primers
1622977	CGTCCGCGTCTACGTCCGCGTCCGCGCCTACGTCTACGTCCGCGTCTACGCCCA	Design primers
1623127	CGCCCG-CGCCCG-CGTCCG-CGCCCG	Design primers
1623152	GTCTACGCCCGCGCCCGC-GTCTACGCCCGCGCCCGC-GTCTACGCCCGCGACTGC	Design primers
1623291	TCTACGCCCGCGTCTACGCCCGCTTCTACATCCGCGTCCGCGCCCGCGTCTACGCCCGCT	Design primers
1628551	CTGCCGCAGAGGCCTCCACGTCTGGGTCTGAGGCCTCCACGTCTGGGTCTGAGGCCTCCACGT	Design primers
1628713	AGGCCTCCACGTCTGGGTCTGAGGCCTCCACCTCTGTGCCTGAGGCCCCCACGTCTGGGTCTG	Design primers
1628812	CTGCCGCAGAGGCCTCCACGTCTGGGTCTGAGGCCTCCACGTCTGGGTCTGAGGCCTCCACGT	Design primers
1638701	GGCGAT-GCCGAT-GCCGAT-GCCGAT	Design primers
1643271	GATGCGGACCTGTTCGATGCAGACCCGCTCAACGCGGACCTGCTC	Design primers
1651719	CCGGCCCGGGCGGGCCCGGGCCGGA	Design primers
1684166	AAACGGGCCGGCGGTTGTCGGACGGGCCGGCGGGTGTCGGACGGGCCGGCGGGTGTC	Design primers
1685918	GTGGCCTTCGTGGCTTTCGTGGCCTTC	Design primers
1689807	CTCAGTCCTGGGCGGTGTCGGCCGCGTCCCGGGCGGTGTCGGCCGCGTCCCGGGCGGTGTCGG	Design primers
1730106	CTCGCCCACGCCCTCGACCTCGCC	Design primers
1737686	GCCCATGCCGATGCCGATGCACAT	Design primers
1779377	ATGGTCCGGGTGGTCCTGTGGGTCCGGGTGGTCCGGTGGGTCCGGGTGGTCCGG	Design primers
1779432	GGGTCCGGGTGATCCGGTGGGTCCGGGTGGTCCTGAGGGTCCGGGTGGTCCTGAGGGGCCGGGTGGTCCTGTGGGTCCGGGTGGTCCTGTGGGTCCGGGTGGTCCTGTGGGTCCGGGTGGTCCTGAGGGGCCGGTTGATCCGGTGGGTCCGGGTGGTCCTGAGGGTCCGGGTGGTCCTGA	Design primers
1779672	GTCCCAGTGTCGGCG-GTCCCAGTCTCCGTG-GTCCCAGTCTCCGTG-GTCCCAGTGTCCCTG	Design primers
1823505	GCCGGCCA-GCCGGCCA-GCCGGCGA	Design primers
1834975	GTCACCGTCACCAGCCTCACCGTCACCAGGCTCACCGTCACCGTC	Design primers
1844826	GCGACATGTCCAAGCACGACGACAAGTCCAAGCACGACGGCAAGTCCAAGCACG	Design primers
1868270	CCGACGCCGACTTCGACGCCGCCG	Design primers
1877366	CGCCGACCGGCACCGCGTCGCCGACGGCCACTGCGTCGCCGACCGGCACCGCGTCGCCGACGGCCACTGCGTCGCCGACCGGCACTGCGTCGCCGACCGGCACTGCGTCCCCGACCGGTACTGCGT	Design primers
1877500	GCCACTGCGTCGCCGACCGGTACTGCGTCCCCGACCGGCACCGCGTCGCCGACG	Design primers
1879193	ACGTCACCCTCACCTGTGGCGACGACATTGCCGTCACCTGTGGCGACGACATTGCCGTCACCTGTGGCGACG	Design primers
1953205	AACCCCCGCC-GACGCCCGCC-GACGCCCGAC-GTCGCCCGCC-GACGCCCGCC-GACGCCCGCC	Design primers
2071927	TCCGCTGCGCCGTCGGGCTCTGCCACGCCGTCGGGCTCCGCCACGCCGTCGGGCTCCGCCACGCCGTCCGGC	Design primers
2089547	CGGCCTCTTCCGGGCCCT-CGGCTCCTCCCGGGCCCT-CGGCTCCTCCCGGGCCCT-CGGCTCCTCCCGGGCCCT	Design primers
2089645	CCCGGGCCCCCGGCCCCCCGGGCC	Design primers
2097322	GGCGGCGGTGGCCGCGGCGGCGGC	Design primers
2107047	CCGCCGCCACCGCGGCCGGCGCCG	Design primers
2113998	GACGGGG-GCCGGGG-GCCGGGG-GCCGGGG	Design primers
2151843	GGCGGTAGCCGCGGTCGAGGACGTAGCCGCGGTTGAGGACGTAGCCGCGATCGA	Design primers
2182382	GTCGCGACAAAGGCGGTCGCGAAGAAGACGGTCGCGAAGAGGGCG	Design primers
2182606	CCGGC-CCGCC-CCGCC-CCGGT-CCGAC	Design primers
2232411	CGTCGT-AGCCGT-AGCCGT-AGCCGT-AGCCGT-AGCCGT	Design primers
2273186	GGTGGCGGTGATGGCGGTGATGGCGGT	Design primers
2308634	TC-GC-TC-GC-GC-TC-TC-GC-GC-TC-GC-GC	Design primers
2339417	GGCCGGTGGGCTGGTGGGCCGGTA	Design primers
2364432	TCTGATCC-ACTGATCC-ACTGATCC	Design primers
2395910	AGGTCCAGATCCAGGTGCAGGTCG	Design primers
2406121	GTCTCGGCTGGGCTGGCGGATTCGGCGGGGCTGGCGGTTTCGGTTGGGCTGGCGGTTTCGGTTGGGCTGGCG	Design primers
2411398	CGCCAGCAGGGTGGGTCG-GGTCAGCCGGGTGGGTCG-GGTCAGCCGGGTGGGTCG-GGTCAGCCGGGTGGGTCG	Design primers
2459135	GCGCGGCGGGAGCGGCGGGCGCGGCAG	Design primers
2502104	ACCGGAT-GCCGGAT-GCCGGAT-GCCGGAT	Design primers
2526741	GCGCCGACGCCGACGCCGGCACCG	Design primers
2527524	GCCGGCACCGGCGCCGCCACCGGC	Design primers
2532555	CGCGCAGCGCCGGGCGGCGCTGCGC	Design primers
2551272	TGGCGGCGGCGGTGTCGGTGGTGG	Design primers
2564978	CGGTGGCGGGGGCGATGGCGGCGG	Design primers
2632368	ACGGCGGCGGCGACGGCGAGGGCGACGGCG	Design primers
2633104	TCGGCGTCGTCGGTGTCGTCGGTGTCG	Design primers
2763567	CAGGTCAC-CAGGTCAC-CAGGCCAC	Design primers
2820038	CCACCT-CCACAT-CCACAT-CCACAT-CCACGT	Design primers
2820077	CTGACA-CCGACA-CCGACA-CCGACA	Design primers
2830787	TGGTGGTCGTGGTGGTGGTGGTGC	Design primers
2841233	GACCGGTGCCACCGGCCGGACCGCCGTCGGGGCCACCGGCCGGACCGCCGTCGGGGCCACCGGCCGGACCGC	Design primers
2846303	GCGGGCACATGTGTGACG-GCGGGCACATGTGTGACG-GCGGGCCCACGCGTGACG	Design primers
2858208	GGCGGCGACGGCGGCGACGGCGGT	Design primers
2873858	CGCCGCCGCCGTCACCGCCGCCGG	Design primers
2889609	GCACCA-GCACCA-GAACCA-GCACCC	Design primers
2894494	CA-GC-CC-CA-CC-CC-CA-CC-CC-CA-CC-CC	Design primers
2897292	CGCCCCCGCCTCCGCCGCCGGCCC	Design primers
2904985	GGTGCCGGTCCCGGTGACCGTGCC	Design primers
2917901	ACCGTCACCGCCGCCCACCGTCACCACTGCTCACCGTCACCACTGCCC	Design primers
2922072	CTCCGGT-CGCCGGT-CGCCGGT-CGCCGGT	Design primers
2960056	GCAGCGGCATCGGCAACGGCCGCG	Design primers
2991321	GCC-ACC-TCC-GCC-ACC-GCC-GCC-CCC-TCC	Design primers
3066945	CGATCAGT-GGATCAGT-GGATCAGT	Design primers
3106273	GCCACCGCCAACGCCACCGCCAGC	Design primers
3122134	GTCTCGACCGGGGGTGCCGCGATCGGGGGTGCCGCGATCGGGGGT	Design primers
3127333	GTCTCGACCGGGGGTGCCGCGATCGGGGGTGCCGCGATCGGGGGT	Design primers
3132532	GTCTCGACCGGGGGTGCCGCGATCGGGGGTGCCGCGATCGGGGGT	Design primers
3133885	GCCGGC-GCCGGC-TCCGGC-GCCGCC	Design primers
3136937	CGGCGGCGGCGACGGCAGCGGCGA	Design primers
3167740	GTCGGTGCCGTCGGT-AGCGGTGCCGTCGGT-AGCTGTGCCGTCGGT-AGCTGTGCCGTCGGT-AGCTGTGCCGTCGGT	Design primers
3234010	CGGGCCGGTCCCGGCCGGCCCGGTC	Design primers
3272398	GCCGAC-ACCGAC-ACCGAC-ACCGAC	Design primers
3307795	ACGACC-CCGACC-CCGACC-CCGACC	Design primers
3310599	CGCCCAGGGCGGCGGCCACGGCGGCGAGCAGGGCGG	Design primers
3349343	GGCGCTCGCGCTGGCCCTGGCGGT	Design primers
3382441	GGCCGGCGCGGCCGACGCGGCCTGCGC	Design primers
3408380	GACCAGCTCGGCGTCGCTACCGGCCAGCCCCACGTCGCTACCGACCAGCTCGGCGTCGCTACC	Design primers
3409930	CCGCCACCACCGCCATCACCGCCGCCA	Design primers
3494936	CGCGCCGTCCGTTAACC-GGCGCCGTCCGTTAACC-GGCGCCGTCCGCTAGCC	Design primers
3508281	GACGACCGGGAGATGGGCCGCGAAGGCGACTGGGAAAGGGGCCGCGAAGGCGACTGGGGGAAGGGCCGCGAA	Design primers
3566503	TGTGTTCTACCCGTCGCGCGGTGTTCTACCCGTTGGGCGGTGTTCTACCCGTTGAGCGGTGTTCTACCCGTTGAGC	Design primers
3622476	GCGCGGCTCAGGTCCCGGCGCTCTCGGGACAGGTCCCGGCGCTCTCGGCTCAGGTCCAGGCGC	Design primers
3644551	GCTGAGTCGGCGGGCTGACTCGACGGGCTGAGTCGGCGG	Design primers
3668404	TGGTAGCCCGGCTCGGCCCGGTACGCCGGCTCGGCCCGGTACGCCGGCTCGGCC	Design primers
3669112	GGGACCGCCGGGTCGGGAACAACCGGGTCGGGGACCACCGGATCCGGGACCGCCGGGTCGGGGATCACCGGATCG	Design primers
3671557	CGGCACCGTCCGCCTCGGCGGGCCCATCCGCCTCGGCGGCACCATCCGGCCCGG	Design primers
3672487	TTCCGCCGTCTCGGAAGCCTCCGCCGCCTCGGAAGCGTCCGCCGCCTCGGAAACCTCCGCCGTCTCGGAAGC	Design primers
3691702	CACTCTACTCCACTTCCCTCCACCC	Design primers
3699984	CCCGGCCCGCGCCGGCGCGCCCCGGGCCGC	Design primers
3706869	GGCGGTGGGGGTCGCGGTCGCGGT	Design primers
3718631	CTGTCGTGCTGTTGTGCTGTTGTG	Design primers
3735898	GCGGTGGTCGGTGGCGTGGTCGTCGGGGGCGGCGTGGTCGGCGGC	Design primers
3736831	TTCACGATG-GTCACGATG-GTCACGATG	Design primers
3795905	CACCCGGAAGCGGAAGCGGAGCCGGAACCGGAAGCGGAACCGGAAGCGGAACCG	Design primers
3795974	CCGGAA-CCGGAA-GCGGAA-GCGGAA-GCGGAA-GCGGAA	Design primers
3802298	CTCGCC-GTCGCC-GTCGCC-CTCGCC	Design primers
3806066	GCC-GGC-GCC-GCC-GCC-GTC-GCC-GCC	Design primers
3809075	CCGGAG-CCGGAG-CAGGAG-CAGGAG-CAGGAG	Design primers
3809369	GCCGCGGCGAAGCCCGAG-CCCGAGGCGAAGCCCAAG-CCCGAGGCGAAGCCCAAG-CCCGAGGCGAAGCCCGAG-CCCGAGGCGAAGCCCGAG-CCCGAGGCGAAGCCCGAG-CCCGAGGCGAAGCCCGAG	Design primers
3858926	CAGGGC-GAGGGC-GAGGGC-CCGGGC	Design primers
3882817	GGCTGACCGGCCGACCGGCTGGCC	Design primers
3892326	TCTCGACCCGACCAGTTCTCAACCTGAACAGTTCTCATCCCGAACAGT	Design primers
3896146	GGCGGGACGGGACGGGGAGGCGCGG	Design primers
3909501	ACAAGAGCGACGAGGGCAAGAACGACAAGGGCAAGGGCGACAAGG	Design primers
3945263	CACGAGGACGAGCACGGGCACGAG	Design primers
3945317	CACGAGGACGAGGACGAGCACGGGCACGAGGACGAG	Design primers
3985405	ACTCGACCTGGACCAACCCGGCCGGGACCAACCCGGCCGGGACCA	Design primers
3985494	CCGGCGAGGAGGTCC-GGGTCGAGGAGGTCC-GGGTCGAGGAGGTCC-GGGTCGAGGAGGTCC-GGGTCGAGGAGGTCC-GGGTCGAGGAGGTCC-GGGTCGAGGAGGTCC	Design primers
3990509	ACG-CCG-CCG-CCG-ACG-TCG-ACG-GCG	Design primers
3990618	GCGGCCTCC-TCGGCCTCC-TCGGCCTCC	Design primers
3990754	CCTCCTCGGCCTCCTCGATCTCCTCGG	Design primers
3991137	GCGGCAGTCGACTCGACCGGCGTGGAGGTGGACTCGACCGGCGTGGAGGTGGACTCGACCGGC	Design primers
4022678	AGCGACGCCCAG-CGCCACGCCCAG-CGCCACGCCCAG-CGCCACGCCCAG	Design primers
4026714	CCGTCAC-CGGTCAC-CGGTCAC-CGGTCAC	Design primers
4029631	TCCCGCTGCGGCGGCACCCCGGCCTCCGGCTGCGGCGGCACCACGCCTGCCCACTGCGGCGGCGCCCCGACCTCCGGCTGCGGCGGCACCTCGACG	Design primers
4085102	GTCGGCGGCGGCGACGGCGTCGTC	Design primers
4120236	GGGAGGCGCGGTGGTGGGAGGTGGAGTGGTGGGAGGTGGGGTCGT	Design primers
4122807	CGGCTGGCACGGCGACGACCGACACGGCGACGACCGGCACGGCGA	Design primers
4136341	CCCGAGCT-GCCGAGCT-GCCGAGCT-GCCGAGCT	Design primers
4156467	CGCCGACGACGACGGCGATGCCGA	Design primers
4175209	CGCTCAGCACGCTCGCCACGGTCACCGCGCTCGCCACGCTCAGCACGCTCGCCA	Design primers
4175266	TCACCGCGCTCGCCCCGCTCAGCACGCTCGCCCCGCTCAGCACGCTCGCCACGCTCACCGCGCTCGCCACGCTCAGCACGCTCGCCCCGCTCAGCACGCTCGCCCCGCTCAGCACGCTCGCCCCGCTCAGCACGCTCGCCACGCTCAGCACGCTCGCCCCGCTCAGCACGCTCGCCCCGCTCAGCACGCTCGCCCCGCTCAGCACGCTCGCCCCGCTCAGCACGCTCGCCACGCTCAGCACGCTCGCCCCGCTCAGCACGCTCGCCACGCTCAGCACGCTCGCCGCGC	Design primers
4212974	GGCGGGGCGGTGGTCGGTGGAGCCGTGGTCGGCGGGGCCGTGGTC	Design primers
4231110	GCCACCAAGCCGGCTGCCGCCAAGCCGGCTACCGCGAAGCCGGCT	Design primers
4251084	GCCAGCGCGAGCGCCAGGGCCAGG	Design primers
4296536	CGTCGTCCGATCCCGCGTCCTCGCCCGGTCCCGCGTCTCCGTCCGATCCCGCGC	Design primers
4302539	CGACTGAC-CGGCTGAC-CGGCTGAC-CGGCTGAC	Design primers
4344679	TCCACACCGACCGCCGGA-TCCACACCGACCGCCGGA-TCCGACCCGACCGCCGGA	Design primers
4363366	CCAACCCGTCCACCCCACCGGCTGACCCGTACGCCCCACCGGCTGACCCGTACGCCCCACCGG	Design primers
4371496	AAGCCGCCGCCCAAGCCG-AAGCCGCCGCCCAAGCCG-AAGCCGCCGCCCAAGCCG	Design primers
4464211	CGGCCC-CGGCTT-CGGCTT-CGGCTT-CGGCTT-CGGCTT	Design primers
4493072	TCGGCGTCGGCATCGCCGGCGGCG	Design primers
4544612	CGCCGCCGCCCCGGCCGCCGCCGC	Design primers
4544714	CAGGGG-CAAGGG-CAAGGG-CAAGGG	Design primers
4576985	TCGTCGCCTTCTTGGCCG-GCGTCGCCTTCTTGGCCG-GCGCGGCCTTCTTGGCCG	Design primers
4596673	TCGGTGCCGGTGCCGGTGTCGGCG	Design primers
4603510	CAC-CGC-TTC-CGC-CGC-CGC-TTC-CGC-CGC-CGC-CTC-CGC	Design primers
4615009	AGACGA-AGACGA-AGACCA-GGACGA	Design primers
4630150	CCCCGGCGCGGTCTGCTCGGCCCCCGGCGCGGTCTGCATCGTCCCCGGTTCGATCTGTTCGGC	Design primers
4633857	CAGGCCGACGTGGTCGGCACGGGCCGCAGTGGTCGGCACGGGCCGACGTGGCCGGCC	Design primers
4635219	CGCGGCCAGCTCCGCGACCACCTCGGCGGCCAGGTC	Design primers
4636913	CGAGGTCGGCGGTGAGGTTGGCGGTGAGGTCGGCAG	Design primers
4730963	GCGTGG-TCGTGG-TCGTGG-TCGTGG	Design primers
4791367	GCCCTT-GCCCTT-GTCCTT-GTCCTT	Design primers
4794733	GCCCGGCCTGGCCCAGGCCGACCCG	Design primers
4799146	CGGTGACGGAAGCAGGGCCGGCGACGGAAGCAGGGCCGGCGACGGGAGCACGGC	Design primers
4819870	CGCCCG-AGCCCG-AGCCCG-AGCCCG	Design primers
4823117	CACCACCACGACCACCGCCGCCAC	Design primers
4848492	CCGCCTCGACCGCCTCCACCGCCTCGG	Design primers
4857280	CCCCGGTCCCGGCCTCGGCTCCGG	Design primers
4867018	GGCCCGGCACGACCCGGCCCGGGCC	Design primers
4867176	GCCCGGCGCGGACCGCCCCGGGCCGGCCAG	Design primers
4877793	GAGCCGGTCCAGGAGACG-GAGCCCGGCCAGGAGACG-GGGCCCGGCCAGGAGACG-GGGCCCGGCCAGGAGACG-GGGCCCGGCCAGGAGACG	Design primers
4880885	CAGCAGCAGGAGCACCAGCAGCAC	Design primers
4907822	GGCGCTCGTCGGCGGAGGGCCGCTCGTCGGCAGAAGGCCGCTCGTCGGCGGAGG	Design primers
4929434	CGTCGC-CGCCGC-CCTCGC-CCTCGC-CCTCGC	Design primers
4942162	CGGGGG-CTTTGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG-CGTCGG	Design primers
4962880	CGTTCCGACCGC-CGTTCCGACCGC-CGTTCCGGCAGC	Design primers
4967716	GCCGAAC-GCCGGGC-GTCGAAC-GTCGAAC-GTCGAAC-GTCGAAC-GTCGAAC-GTCGAAC-GTCGAAC	Design primers
4974508	GCCGGCGCGGCCGACGCGGCCGACGCG	Design primers
5014088	GTGGCCACGGGCCGAGGAAAGTGGGCCACGGGCCGAGGAAGGCCGGCCGCGGGCCGAGAAAAG	Design primers
5014152	GGCCGCGGGCCGGGGAAAACGGCCACGGGCCGGGGAAAACGGCCACGGGCCGGGGAAAGC	Design primers
5017119	CAGGAGC-CAGGAAC-CAGGAGC-CAGGAGC-CAGGAGC	Design primers
5045636	GGTCCGGGGCGGTCT-GACCCGGGGCGGCCT-GACCCGAGGCGGTCT-GACCCGAGGCGGTCT-GACCCGAGGCGGTCT-GACCCGGGGCGGCCT	Design primers
5064350	CTCGGCCACGGCCTCGGCCTCGGC	Design primers
5068041	CCGGCGACCAGCCCGGCCGCCAGCCCGGCGAGCAGG	Design primers
5074054	CGGCGCGACGCCGACCGACAAGGTCCCCGCAACGCCGACCGACAAGGTCCCCGCAACGCCGGCCGACAAGGT	Design primers
5085769	GCCCGCTGACACCGCTAGCCCATGGACACCGCTAGCCCATGGACACCGCTA	Design primers
5100403	GGACCGGGC-GGACCGGGC-GGACCAGGC-GGGCCGGGC	Design primers
5129901	GCCGATCAGTTCCCACCACCCGGTCAGTTCCCACCGCCCGGCCAGTTCCCACCA	Design primers
5145032	CGCCGAGAGCACCGACGACAAGGGCACCGACGACAAGAGCACCGA	Design primers
5148615	CCGTTGTTGTTGTTGCCACCGCCGTTGTTGTTGCCACCGCCGTTGTTGTCGCCACCGCCGTTGTTGTCGCCA	Design primers
5150994	ACGGACGCCGAGCCAACCGAGGCCGACCCAACGGACGCCGAGCCAACCGAGGCCGAGCCAACCGAGGCCGAGCCG	Design primers
5162062	GCCCTACTCGGCGATTCCCTACTCGACGATCCTCTACTCGACGAT	Design primers
5164393	GCCGGGCCAGGTCGGGCTGGACCGG	Design primers
5175586	TCCCGCCGCATCACCGCT-GTCCGCCGCATCACCGCT-GTCCGCCGCATCGCCGCT	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

2743

CCGTGGATAACCGGTGGATAACCGGTGGACAAC