Microsatellites /Tandem Repeats database

Genome: Mycobacterium gilvum PYR-GCK

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
9331CCGGGCGCTGCCGGTGCGGGTGCGGGTGCTGCCGGTGCGGGTGCGGGTGCTGCCGGTGCGGGTDesign primers
257580GGTGGGTGTCGGGGTCGG-CGTGGGTGTCGGGGTCGG-CGTGGGTGTCGGGGTCGGDesign primers
257635GTGGGC-GTGGGC-GTGGGC-GTGGGC-GTGGGCDesign primers
266323ACGACCACG-ACGACCACG-ACGACCACGDesign primers
305595GGT-CGT-CGT-GGT-GGT-CGT-CGT-CGT-GGT-CGT-GGT-GGTDesign primers
481343CGTCTCCCACTCCGCCGTCTCCCACACCGCCGTCTCCCACACCGCDesign primers
540978CACCGG-CACCGG-CACCGG-CACCGGDesign primers
692777GGCGAG-GGCGAG-GGCGAG-GGCGAGDesign primers
1055654CTTCGTCTTCCCTAGTCCATCGTCTTCCCTAGTCCATCGTCTTCCCTAGTCDesign primers
1131530GTCGAGACCGACCCGGCCGAGACCGACCCGGCCGAGACCGACCCGDesign primers
1201771GGCGTGGTCAGACCGGGCGTGGTCAGGCCGGGCGTGGTCAGACCGDesign primers
1272759CCGCAGCGTCGCCGTCCGCAGCGTCGTCGTCCGCAGCATCGCCGTDesign primers
1423659TGGAGCGGC-TGGAGCGGC-TGGAGCGGCDesign primers
1668009CTCCTCGCCTGCTCG-TTCCTCGCCTGCTCG-TTCCTCGCCTGCTCGDesign primers
1895697GAGTCGTCC-GAGTCGTCC-GAGTCGTCC-GAGTCGTCCDesign primers
1995783GCCGACGAC-GCCGACGAC-GCCGACGACDesign primers
2095030CGAAACCCGTCGA-CGAAACCCGTCGA-CGAAACCCGTTGADesign primers
2097638CACGGCGTCAACCGACACGGCGTCAGCCGACACGACGTCAACCGACACGACGTCAACCGADesign primers
2185651CGGAGGCTGTCGAGTCGA-CGGAGGCTGTCGAGTCGA-CGGAGGCTGTCGAGCCGADesign primers
2255606GCCGCCGGT-GCCGCCGGT-GCCGCCGGTDesign primers
2289432GTAACCCTGTGCGCCGTAACTCTGTGCGCCGTAACCCTGTGGGCCGTAACCCTGTGCGCCGTAACCCTGTGCGCCDesign primers
2355770GCCTCCGCCGCCGGGCATGGGGATGCCTCCGCCGCCAGGCGTGGGGATGCCTCCGCCGCCAGGCGTGGGGATDesign primers
2373321GCTCGGTGC-GCTCGGTGC-GCTCGGTGCDesign primers
2760151CGACGACTCCGAGGA-CGACGACTCCGAGGA-CGACGACTCCGAAGA-CGACGACTCTGAGGADesign primers
2892670CCGCCTCGGAAGACG-CCGCCTCAGAAGACG-CCGCCTCAGAAGACG-CCGCCTCGGAAGACGDesign primers
2899777GTCTGA-GTCCGA-GTCCGA-GTCCGA-GTCCGA-GTCCGADesign primers
2899936GTCGCTCTCTGCCTT-TTCGCTCTCTGCCTT-TTCGCTCTCTGCCTTDesign primers
2999026GCGCCGCA-GCGCCGCA-GCGCCGCADesign primers
3085689CATCGG-CATCGG-CATCGG-CATCGGDesign primers
3104220TCGGGCTCGGGTTCAGGCTCGGGTTCGGGCTCCGGTDesign primers
3151711GC-CC-CC-GC-AC-CC-GC-AC-CC-GC-AC-CC-GC-AC-CC-GC-AC-CCDesign primers
3157845CCGTCGGGGCCTGACGTGATGACAG-ATGTCGGGGCCTGACGTGATGACAG-ATGTCGGGGCCTGACGTGATGACAGDesign primers
3305151GGCTCGCGGCTCAGCCGCTCCTGTTGTTTCGCGGCTCAGCCGCTCCTGTTGTTTCGCGGCTCAGCCGCTCCTGTTDesign primers
3333111ACGCCTAGTTGACGACG-TCGCCTAGTTGACGACG-TCGCCTAGTTGACGACGDesign primers
3473993TTCGGTGTAGTTGGCCTTCGGTGTAGTTGGTCTTCGGTGTAGTTGGTCDesign primers
3564857GACCTCGGGGCC-GACCTCGGGGCC-GACCTCGGGGACDesign primers
3575188GCCGACGCTGATGCCGACGCGGATGCCGACGCGGATDesign primers
3640973CTTCGA-CTTCGA-CTTCGA-CTTCGADesign primers
3646209GCCGACCGT-GCCGACCGT-GCCGACCGTDesign primers
4130539CGGCAG-CGACAG-CGACAG-CGACAG-CGACAG-CGACAGDesign primers
4239546TGACACCGAGCCGGAGGCGAGCATCGAGACCGAGCCGGAGGCGAGCATCGAGACCGAGCCGGAGGCGAGCATDesign primers
4468658GGCGGGGCGATCGGAGGCGCGGCGATCGGAGGCGCGGCGATCGGADesign primers
4652391CGTCGAACCAGACCGTCGAACCAGGCCGTCGAACCAGACDesign primers
4693022ACGGGAACCGAGGCG-TCGGGAACCGAGGCG-TCGGGAACCGAGGCGDesign primers
5000600GTAGTTGGCCGTCGG-GTAGTTGGCCGTCGG-GTAGTCGGCCGTCGGDesign primers
5136373CGTCGC-CGTCGC-CGTCGC-CGTCGC-CGTCGCDesign primers
5241022CACGAC-CACGAC-CACGAC-CACGAC-CACGACDesign primers
5406033CCACCGGAG-CCACCGGAG-CCACCGGAGDesign primers
5406172CACCACCGG-CACCACCGG-CACCACCGGDesign primers
5406371ACCGGCCGC-ACCGGCCGC-ACCGGCCGCDesign primers
5406720CCCGTGCCG-CCCGTGCCG-CCCGTGCCGDesign primers
5406842GCCGCCCTG-GCCGCCCTG-GCCGCCCTGDesign primers
5406882CCCGTGCCG-CCCGTGCCG-CCCGTGCCGDesign primers
5406924GTGCCACCC-GTGCCGCCC-GTGCCGCCC-GTGCCGCCC-GTGCCGCCC-GTGCCGCCCDesign primers
5407033TGCCGCCGG-TGCCGCCGG-TGCCGCCGGDesign primers
5407080CCGCCCGTG-CCGCCCGTG-CCGCCCGTG-CCGCCCGTGDesign primers
5407789CAGCGCCCG-CAGCGCCCG-CAGCGCCCGDesign primers
5408017CGTTGCCGC-CGTTGCCGC-CGTTGCCGCDesign primers
5408055TTACCGCCG-TTACCGCCG-TTACCGCCGDesign primers
5522151CATCGG-CATCGG-CATCGG-CATCGGDesign primers

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