Microsatellites /Tandem Repeats database

Genome: Mycobacterium gilvum PYR-GCK

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
257581GTGGGTGTCGGGGTCGGC-GTGGGTGTCGGGGTCGGC-GTGGGTGTCGGGGTCGGCDesign primers
257636TGGGCG-TGGGCG-TGGGCG-TGGGCG-TGGGCGDesign primers
266323ACGACCACG-ACGACCACG-ACGACCACGDesign primers
540978CACCGG-CACCGG-CACCGG-CACCGGDesign primers
692777GGCGAG-GGCGAG-GGCGAG-GGCGAGDesign primers
1055656TCGTCTTCCCTAGTCCA-TCGTCTTCCCTAGTCCA-TCGTCTTCCCTAGTCCADesign primers
1423659TGGAGCGGC-TGGAGCGGC-TGGAGCGGCDesign primers
1668010TCCTCGCCTGCTCGT-TCCTCGCCTGCTCGT-TCCTCGCCTGCTCGTDesign primers
1895697GAGTCGTCC-GAGTCGTCC-GAGTCGTCC-GAGTCGTCCDesign primers
1995783GCCGACGAC-GCCGACGAC-GCCGACGACDesign primers
2255606GCCGCCGGT-GCCGCCGGT-GCCGCCGGTDesign primers
2373321GCTCGGTGC-GCTCGGTGC-GCTCGGTGCDesign primers
2899781GAGTCC-GAGTCC-GAGTCC-GAGTCC-GAGTCCDesign primers
2899937TCGCTCTCTGCCTTT-TCGCTCTCTGCCTTT-TCGCTCTCTGCCTTTDesign primers
2999026GCGCCGCA-GCGCCGCA-GCGCCGCADesign primers
3085689CATCGG-CATCGG-CATCGG-CATCGGDesign primers
3151714CCCGCA-CCCGCA-CCCGCA-CCCGCA-CCCGCA-CCCGCADesign primers
3157847GTCGGGGCCTGACGTGATGACAGAT-GTCGGGGCCTGACGTGATGACAGAT-GTCGGGGCCTGACGTGATGACAGATDesign primers
3305154TCGCGGCTCAGCCGCTCCTGTTGTT-TCGCGGCTCAGCCGCTCCTGTTGTT-TCGCGGCTCAGCCGCTCCTGTTGTTDesign primers
3333112CGCCTAGTTGACGACGT-CGCCTAGTTGACGACGT-CGCCTAGTTGACGACGTDesign primers
3640973CTTCGA-CTTCGA-CTTCGA-CTTCGADesign primers
3646209GCCGACCGT-GCCGACCGT-GCCGACCGTDesign primers
4130542CAGCGA-CAGCGA-CAGCGA-CAGCGA-CAGCGADesign primers
4693023CGGGAACCGAGGCGT-CGGGAACCGAGGCGT-CGGGAACCGAGGCGTDesign primers
5136373CGTCGC-CGTCGC-CGTCGC-CGTCGC-CGTCGCDesign primers
5241022CACGAC-CACGAC-CACGAC-CACGAC-CACGACDesign primers
5406033CCACCGGAG-CCACCGGAG-CCACCGGAGDesign primers
5406172CACCACCGG-CACCACCGG-CACCACCGGDesign primers
5406371ACCGGCCGC-ACCGGCCGC-ACCGGCCGCDesign primers
5406720CCCGTGCCG-CCCGTGCCG-CCCGTGCCGDesign primers
5406842GCCGCCCTG-GCCGCCCTG-GCCGCCCTGDesign primers
5406882CCCGTGCCG-CCCGTGCCG-CCCGTGCCGDesign primers
5406930CCCGTGCCG-CCCGTGCCG-CCCGTGCCG-CCCGTGCCG-CCCGTGCCG-CCCGTGCCGDesign primers
5407033TGCCGCCGG-TGCCGCCGG-TGCCGCCGGDesign primers
5407080CCGCCCGTG-CCGCCCGTG-CCGCCCGTG-CCGCCCGTGDesign primers
5407789CAGCGCCCG-CAGCGCCCG-CAGCGCCCGDesign primers
5408017CGTTGCCGC-CGTTGCCGC-CGTTGCCGCDesign primers
5408055TTACCGCCG-TTACCGCCG-TTACCGCCGDesign primers
5522151CATCGG-CATCGG-CATCGG-CATCGGDesign primers

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