This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 174186 | TTCTTCTTCTCCTTCTTGTTCTTG | Design primers |
| 321826 | GAAACGCTGTGGCTGTTGGACTGAGCGCTGCGGCTGTTGGACTGAGCGCTGCGGCTGTTGGAC | Design primers |
| 632343 | TGTGGTTGTGTGTTGTTGTGTGTGGTACTG | Design primers |
| 683563 | GGGCGGAATGGGTGGAATGGGCGGCAT | Design primers |
| 715345 | CCGGACTTCGGCTGTTCGGACTTCGGCTGCTCGGACCCCGGCTGTTCGGACCCCGGCTGT | Design primers |
| 759565 | GTAAGGAACAGCCGAA-GTCCGAAACAGCCGAA-GTCCGAAACAGCCGAA-GTCCGAAACAGCCGAA-GTCCGAAACAGCCGAA-GTCCGAAACAGCCGAA-GTCCGGAACAGCCGAA-GTCCGGAACAGCCGAA | Design primers |
| 869541 | TTTTCTTTTTTTTCTTCTTCTTCT | Design primers |
| 1055272 | ATCAGCAGCGGCTTCGGGTGCAGC-CTCAACAGCAGCTTCGGGCGCAGC-TTCAACAGCAGCTTCGGGCGCAGC-TTCAACAGCAGCTTCGGGCGCAGC-TTCAACAGCAGCTTCGGGCGCAGC-TTCAACAGCGGCTTCGGGCGCAGC-TTCAACAGCGGCTTCGGGCGCAGC-TTCAACAGCGGCTTCCGGTGCAGC-TTCAACAGCGGCTTCCGGTGCAGC | Design primers |
| 1370500 | AGTGCTG-AGTTCTG-AGTTCTG-AGTTCTG | Design primers |
| 1421496 | GTCATGGTCATCATCATGGTGATG | Design primers |
| 1615010 | AACAGAAGAGCGACCAGAAGACCGAGCAGAAGAGCG | Design primers |
| 1660793 | GATGAACCCGATGCACCCGAAGAACCC | Design primers |
| 1682795 | CA-TA-AA-AA-CA-CA-GA-AA-AA-GA-TA-TA-AA-AA-AA | Design primers |
| 1936297 | TC-TT-TT-TC-TG-TT-TG-TT-TT-TC-TT-TT | Design primers |
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