Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Nocardioides sp. JS614

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
1661	ACCCACCGCGGCCCCACGGCGGCCCCACGGCGG	Design primers
4751	ACAGCACGCAAGGGGGGC-TTCGCACGCAAGGGGGGC-TTCGCACGCAAGGGGGGC	Design primers
4816	TGGACCCCCCGAAGGACGCCCCGAGGGACCCCCCGA	Design primers
16664	TGGGTGAGCCGCCGGTGAGCCGAGGGTGACCCG	Design primers
18761	GCCGGCGCGGGCGCCGGGGTCGGC	Design primers
43090	CGGTCTCGG-TGGTCTCGG-TGGTCTCGG	Design primers
81038	GAGGAAACGGGAGGTAACCGGAGGTAACCG	Design primers
104346	GTCGTCGTCGACGTCGACGTCGAC	Design primers
114614	TCGTCGTCTTCGTCGTCTTCGCCG	Design primers
117808	AACGGGAGTCAACCGGAGGCAACGGGACAC	Design primers
125037	GACCGGCCCAGT-GACCGGCCCAGT-GGCCTGCCCAGT	Design primers
131731	GTCGGC-CTCGGC-GTCGGC-GTCGGC	Design primers
152577	CCATGCCCAGGACCCAGCCCAGGACCCAGCCCAGGA	Design primers
161361	CGTCGACGGCGACGTGGACGTCTA	Design primers
171315	GCGGCGGCGACGACGGCGGCGGCT	Design primers
171692	GGCTCGGACCTGCCCAGCATCGACCCCTCGGACCTGCCGAGCATCGATCCCTCGGACCTGGCCAGCATGGAC	Design primers
178474	TCGTCGCTGCCCTGGTCGCTGGCCTGGTCGCTGGCC	Design primers
183264	CGCGGCCTCGGCCGCGACCGGGGC	Design primers
193671	CCCAGGTCACGGCCCGGGTCACGGTCCGGGTCACGGCCCAGGTCACGC	Design primers
228050	GCGACCGGGCCACAGAAGACTGGGCCACAGAAGACTGGGCCACAG	Design primers
231780	TCGGTCACGTCG-CTGGTCACGTCG-CTGGTCACGTCG	Design primers
242890	CGGCCGCGG-TGGCCGCGG-TGGCCGCGG	Design primers
254078	GGTCAGGGGCGGGCGATCAGGCGCGGGCGGCCAGGCGCGGGC	Design primers
255740	GTCGGCGCCGGCGTCGCCGCCGGC	Design primers
258816	CGACGACGATGACGACGACAACGACGACAA	Design primers
267126	GACTCCGGT-GACCCCGGT-GACCCCGGT-GACCCCGGT	Design primers
275705	CACTCGGCGCGCTCGGCGCCCTCGGCG	Design primers
319407	CTGGTC-CCGGTC-CCGGTC-GTGGTC	Design primers
320254	CGGCCGCGGCCGGGCGGGGCGGGCTGCGGC	Design primers
329452	TCCGCCCCG-GCCGCCCCG-GCCGCCCCG	Design primers
334664	CCCAGC-ACGAGC-ACGAGC-ACGAGC-ACCAGC-ACGAGC	Design primers
334985	CCGAAGGAC-ACGAAGGAC-ACGAAGGAC	Design primers
335060	CGCAAGGCGGACACGCACACGGGGGACACGCACACGGGGGACACG	Design primers
346739	CGGCTCCCGCTCGGGCTCGGGCTC	Design primers
346847	CTGCCCGGCCTGCTGCCCGGCGTGCAGCTCGGCCTGCTGCCCGGCGTG	Design primers
348897	GGCCAC-CGCCAC-CGCCAC-CGCCAC	Design primers
390240	CGGTGAGGTGCGGGGTGGTGAGGTG	Design primers
390708	GTGGCCGTGCTCGTGGCCGGGGTCGTGGCCGCGCTC	Design primers
396124	CCGGGCTGGTCCGGGGCTGGCCCGGCGCTGGTCCGGGGCTGGCC	Design primers
398763	CGTCGGCTTCGGCCTCGGCGTCGG	Design primers
407365	CGGCGAAGAAGGCGGCCAAGAGGGGTGCGAAGAAGG	Design primers
407403	CCGGCCAAGAAGGCGGCGGCCAAGAAGACCGCTACCAAGAAGGCG	Design primers
408861	GCGTGGTCGCAGGGGTGGTCGCAGGGGCGGTCGCAG	Design primers
416716	CGGGGCCGGTGCCGAGGCCGAGGC	Design primers
440551	CGGCGCGGCCAGGCGCAGCCCGGCGCCGTCCGGAGCGGCG	Design primers
453124	CCTGGGCCGCCCAGGACTGAGCTGCCCAGGACTGAGCTGCCCAGG	Design primers
453170	CTGAGCTGCTCGGGGCTGAGTCGCTCGGGGCTGAGTCGCTCGGGG	Design primers
455946	CCCCGAGCCGGCCTGAGCCGCCCCGCGCTG	Design primers
481757	TGGTCGAGG-ACGGCGAGG-ACGGCGAGG-ACGGCGAGG-ACGGCGAGG-ACGGCGAGG	Design primers
491487	ACCAGGGAGTGCCCGATCATGCAGTGCCCGACGAGGGAGTCCCGG	Design primers
527662	CGATGAGCCCGGTCCGATGAGCGAGGTCCGATGAGCGAGGTC	Design primers
536437	CGGCCGGCCTTCGAGCGGACCGTGGCCGGCCCTTCGAGCGGACCGTGGCCGGCCCTTCGAGCGGACCGT	Design primers
549677	GTGGGCTGGCGGGTGGGCAGGTGGGTGGGCTGCCGG	Design primers
576128	TGGCGCTGGCCCGGGCGCTGGCGG	Design primers
615613	CTGGGCCAGCAGGTCGGCCAGCAGGTCGGCCAGCAG	Design primers
657180	TCGGTCTGAATCGGCCTGACTCGAGCTGAA	Design primers
663434	TTCTCTC-GGCTCTC-GGCTCTC-GGCTCTC-GGCTCTC-GGCTCTC	Design primers
687173	TCGGTCGACC-CCGGTCGACC-CCGGTCGATC	Design primers
707184	GGGCCCGGGCCGAGGCCCGGGACC	Design primers
712919	CCGTAGGGCTGC-TGGTAGGGCTGC-TGGTAGGGCTGC	Design primers
734159	ACCCCGGAGTCCACTCCGGAGGCCACCCCGGAGCCG	Design primers
747110	CGTCGACGTCTACCTCGACATCGA	Design primers
749550	CCTCGCCCAGCACCCGCCCAGCACTCGCCCGGC	Design primers
764147	CCGGCTCGGGCTGCGGCTCCGGCA	Design primers
792806	CCGTCGGGGCCGTTGGGGCCGTTGGGG	Design primers
799883	GGGGCGGCCGGAGCGGTGGCGGCCGGAGCGGTGGTCGCCGGAGCGGTGGTCGCCGGAGCGGTGGCCGCCGGAGCGGTGGCCGCCGGACCG	Design primers
828610	CTCGGATTCGGGCTCGGGTTCCGGCTCGGGTTCCGG	Design primers
947611	TCGTCGGCGACGCCCTCGTCGGCGACGCCCTCGCCGGCGGTGCCCTCGTCGCCGACGGCC	Design primers
994682	CCGAGCTGGCCGAGCTGACCGAGCAGG	Design primers
1002403	GACCTCGCCGACCTCGACGACCTGGCC	Design primers
1006742	GCGCCGGCGGGCGCGCCGTCGGGCGCGCCGTCGCGC	Design primers
1015203	GTCGTCGGGGTG-TCCGTCGGGGTG-TCCGTCGGGGTG	Design primers
1039864	TTCGCCCGGTCTCTGCCCGGTCTGTGCCCGGTC	Design primers
1041639	CGGCCTCGGGTCCAGCCTTGGGTCCGGCCTTGGATC	Design primers
1070267	CGCGCGGGAGTGCGGGCGGAAGTGCGGGCGGAAGTG	Design primers
1113973	GGCCCGGTCCATGGCCCGGTCCACTGCCCGCTCCAT	Design primers
1118803	TCCGCGACCGCGTTCGCGGCCGCG	Design primers
1125745	CGTGGTCGGGGTCGAGGTCGTGGC	Design primers
1134289	GGGCCC-GGGCCC-GGGGCC-GGGGCC	Design primers
1168528	AC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC	Design primers
1183947	CCGAGCGCGAGCCCGAACCCGAGC	Design primers
1187597	CGGGTGAGGGTGCGGGTGAGGGTGCGGGTG	Design primers
1201313	GCGGCCGACCCCGCTGCCGATCCCGCCGCCGACCCCGCCGCCGACCCC	Design primers
1212476	CGGCGCGGCTCGGCACGCCGCCGCG	Design primers
1279572	GGCCCCGGCGCCGGCCGCGACCCC	Design primers
1280423	GCCGGGCCCGGGCGGCCCGGCCCGG	Design primers
1294551	CAGTCGCGTCGGCAGTCACGCCGGCAGTCACGCCGG	Design primers
1307783	GGATCCGGAACCAGATCCGGATCA	Design primers
1321282	CCCGGCACCCACGGCACCCACGGCACC	Design primers
1325485	ACGAGG-TCGAGG-TCGAGG-TCGAGG	Design primers
1327740	CCGGCGCACCCGGCGACGCACCCGGCGACGCACCCG	Design primers
1351137	AGCAGGAACAGCAGGATCAGCAGGACC	Design primers
1404595	GGTCAGCGCGG-GGCCAGCGCCG-GGTCAGCGCGG-GGTCAGCGCGG-GGTCAGCGCCG	Design primers
1410159	CTCACCCAGCTCATCACCGAGCTCCTCGCCGAGCTC	Design primers
1412146	TGGGCGCAGGGCGGGCGCAGGGTGGGCGCTCGG	Design primers
1453148	GGGCCCTGGGTCTCG-GGCGCCTCGGTCTCG-GGTGCCTCGGTCTCG-GGTGCCTCGGTCTCG	Design primers
1455858	CGTCCTCCGCAGCGTCCTCAGCGGCGTCCGTCGCAG	Design primers
1456638	GGCTCAGGCCTGGGCGTCCCTGGCCTGGGCGGCCAAGGCCCGGGC	Design primers
1503058	CGAGAA-CGCGAA-CGCGAA-CGGGAA	Design primers
1512482	AGCCCGAGATCGAGGCGGAGATCGAGGCCGAGATCG	Design primers
1524049	CCGCCTGGTCCGGACTGGTCCGGACTGGTC	Design primers
1528908	TCGAGGTCCAGGTCGAGATCGAGG	Design primers
1564502	TGACCGACCCCGTGTCCGATCCCGTGCCCGATCCCG	Design primers
1580690	CCGGGCGCCGCGGGCGCCCCGGGCGCCCCGGCCGCC	Design primers
1585857	CCACCTGGACAACCTGGACAACCTGGA	Design primers
1593673	TTGCGGCCGTCGCGGCCGTCGCGGCCG	Design primers
1616042	CTGTGGACAAGCCTGTGGACAAAGCTGTGGAGGAGC	Design primers
1632020	AGCCGGGAGAGCCGGGTGACCCGGGAG	Design primers
1711955	GGCCTCCTC-GGCGCCCTC-GGCGCCCTC-GGCGCCCTC-GGCGCCCTC-GGGGCCCTC	Design primers
1719490	CGTGCCCGTGGCCGTGGCCGTGCCCGTGGCCGTGCCCGTGCT	Design primers
1775293	GCGCGGAAGACGGCCAGGAAGACGGTGCGGAAGGCG	Design primers
1797501	GGGGACCGGTCAG-CGGGACCGGTCAG-CGGGACCGGTCGG	Design primers
1798866	GGGTCGCGTCGGGTCGGGCCGGGAC	Design primers
1799077	CACGGCCATGATCACGGCCAAGGTCACGCCCAGGAT	Design primers
1807838	AGGCGGCGCGGAGGGCGGCGCCGAGGGCGGTGCGGA	Design primers
1836118	GCC-GGC-GCC-GCC-GGC-GTC-GCC-GTC-GCC	Design primers
1836653	CGGCGGTGGCGGCGGCTGTGGCGG	Design primers
1845207	GCGGGCTGCCCGGCGGGCTGCTGGGCGGGCTGCGGG	Design primers
1858306	CCATCACGACCAGGGACACCAGGACCAGGGGCACCAGGACCAGGG	Design primers
1877871	ACTTGGAGTCGGCTTCGAGTCGACTTGGAGCCG	Design primers
1878956	CCGGCCGGCGCCGTCCGGCTCGGGGCGGCG	Design primers
1879332	CGGCTCGGGCCCGCTCGGCCTGGCTCGAGC	Design primers
1907313	GCGCCG-GGGCCG-GGGCCG-GAGCCG	Design primers
1916657	CCGGAGCACCCGGCGGAGCACCCGACGGAGCGCCCG	Design primers
1963729	GATCGGGTTCGGCATCGGGAGCGGGATCGC	Design primers
1989452	GGGCCTGGGACTGGGCCTGGCCCT	Design primers
2011441	GCCACTGGCCGA-ACCACTGGCCGA-ACCCCTGGCCGA-ACCCCTGGCCGA	Design primers
2029822	CGGCACCGCCGCCGTACGGTGCGCCGGCCCCGCCGCCGTACGGCGCGCCGGCCCCGCCGCCGTACGGCCAGC	Design primers
2049342	TCGTCGTCGTAGTCGACGTCGTCG	Design primers
2065066	CGTGCTCGTGCGGGTGCTCGTCCT	Design primers
2105423	GCCTGCTCACTCGAACGGCCGGCTCATTCGGACGGCCGGCTCATTCGGACG	Design primers
2105817	AGCTCCTCGGCCAGCTGCTCGACCAGCTCCGCGGCC	Design primers
2134618	CGACTCCGCCGACTCCGACGACTCTGC	Design primers
2145684	CGCGAGCGCGAGCGCCAGCGCGGG	Design primers
2145767	CGGTGTCTG-GGGTGTCTG-GGGTGTCTG	Design primers
2150264	GTCGTCGTCGCCGTGGTCGTCGCCGTGGTC	Design primers
2192938	TCG-CCG-TCG-ACG-ACG-CCG-CCG-CCG	Design primers
2195462	CCGAC-CCGGC-CCGGC-CCGGC-CCGGC	Design primers
2198027	CGACCGCACCGACCACACCGACCACAC	Design primers
2245104	CGACGGCGACGCCCACGGCCACGG	Design primers
2292677	TCGTCCG-AAGTCCG-AAGTCCG-AAGTCCG-AAGTCCG-AAGTCCG	Design primers
2317240	CGGCCTGGGCGACCTGGGCGGCCTGGG	Design primers
2321081	CGATCCCGATCGGGATCCCGACCC	Design primers
2358347	CCGCTCAGGTCACCGCTTAGGCCACCGCTCGGGTCG	Design primers
2373108	GACCAC-GACCAC-GGCCAC-GATCAC	Design primers
2411841	CGGCGTCGGCGGCGGTGTCGGCGG	Design primers
2450870	CGCTCCTGCCGCTCCTGTCCCTCCTGC	Design primers
2452973	GGCTGCTGGGCCTGTTGCTGGGCCTGTTGCTGGGCC	Design primers
2453148	CGGGCTGGGCGGCGGGCTGCGCAGTGGGCTGGGCGG	Design primers
2453255	GCCTCG-GGCTCG-GGCTCG-GGCTCG	Design primers
2453683	CTCGGGCTCCGGCTCGGGGTCGGG	Design primers
2459131	CCCGCCGGT-GCCGCCGGT-GCCGCCGGT	Design primers
2494569	CGCCATCGGCATCACCATCGGCAT	Design primers
2537128	CACCACCGG-CACCACCGG-CACCACCCG	Design primers
2553326	CCGCCGACCATC-CCGCCGACCATC-CCGCCCACCAGC	Design primers
2566246	AGACCA-CGACCA-CGACCA-GGACCA	Design primers
2585458	GGCCGC-GGCCGC-GGCGGC-GGGCGC	Design primers
2620931	GCCCTCGCGCTGAACCTCGCGCTGGCCCTCCCGGTG	Design primers
2663935	CGTGACACCGAG-CGCGACACCGGG-CCTGACACCGGG-CCTGACACCGGG-CCTGACACCGGG	Design primers
2666106	ACGTCGTCGTCGACGGCGAGGTCG	Design primers
2693343	AAGAAGGCGGCCACGAAGAAGCCCGCCGCGAAGAAGCCCGCCGCG	Design primers
2697811	ACGGCACCGCGCGGCACGACCCGGC	Design primers
2735663	CTTGTCGGTTGTCTTGTCGATTGGCTCGTCGGCTGT	Design primers
2756106	CGCGCGCTGCCGCGTCCTGCCGGGTGCTGC	Design primers
2771114	GGCCGCCTTCTTGGC-CGCCGCCTTCTTGGC-CGCGGGCTTCTTGGC	Design primers
2771421	GTCGCCTCGGGGGTCGCCTCGGGAGTCGTCTCGGCG	Design primers
2811916	TCGCCGTCCGTCACGCCGTCCCTCACGCCGTCCGTC	Design primers
2814181	GAGGCCGACGAGGCCGTCGAGGCCGTC	Design primers
2897172	CCTACTTCCGG-GCTACTTCCGG-GCTACTTCCCG	Design primers
2929546	CTGGGCCAGCAGGTCGGCCAGCAGGTCGGCCAGCAG	Design primers
2937105	GTCTTCTGCGCGGACTTCTGCACGGACTTCTGGGCG	Design primers
2964502	GTCGTGGGCTCGGTGGTGGGCTCGGTACTGGGCTCG	Design primers
2987377	CGGCCGGCGCGGTCGGCGCGGTCGGCG	Design primers
3002859	CGCGGCCGGGGCCGCGGGCACGGC	Design primers
3045283	GCCAGCACCGCCAGGACCGCGAGCACC	Design primers
3072612	CGTCCTGGGCGTCCCGGGCGTCCCGGG	Design primers
3093304	TCGGCGTTGGACGGCCCAGCGTTGGACGGCTCAGCGTGCGACGGC	Design primers
3099628	CCGGTCGGGCGGCCGGTCAGGCGACCGGGCGTGCGG	Design primers
3104864	GCCACC-GCGACC-GCGACC-GCGACC	Design primers
3105598	TCGGGCACC-TCGGGCACG-GCGGGCACG-GCGGGCACG-GCGGGCACG-GCGGGCACG	Design primers
3107275	CCGTGCATC-CCCTCCATG-CCGTCCATG-CCGTCCATG-CCGTCCATG-CCGTCCATG-CCGTCCATG-CCGTCCATG-CCGTCCATG-CCGTCCATG	Design primers
3136505	TGGCCGTGGCCTTCGCCGCGGCCG	Design primers
3170635	CTGCGGCGCGCGGCCGCGCGCTGCTGCTCG	Design primers
3186262	GCGAACGCGACCGCCAACGGGAAC	Design primers
3207802	TCGCGC-TCGCGC-TCGTGC-TCGCGC	Design primers
3253078	GCCGGTGCCGCCTTCTTGGCGGGTGCCGCCTTCTTGGCGGGCGTCGCCTTCTTGGCGGGTGCCGCTTTCTTGGCGGGTGCCGCCTTCTTGGCGGGTGCCGCCTTCTTGGCGGGTGCCGCCTTCTTCGCGGGTGCCGCCTTCTTCGCGGGTGCCGCCTTCTTCGCGGGTGCCGCCTTCTTC	Design primers
3253259	CGGGCGCGGCCTTCTTCGCGGGTGCCGCCTTCTTCGCGGGCGCGGCCTTCTTCGCGGGTGCCGCCTTCTTCGCGGGCGCGGCCTTCTTCGCGGGCGCCGCCTTCTTGGCGGGCGCCGCCTTCGCCG	Design primers
3272061	CTGCTGGGTG-CTGGCGGGTG-CTGGCGGGTG-CTGGCGGGTG	Design primers
3279022	CGGTGCGCCGTTCGCTGGGCCGTTCGCTGGGCCGTT	Design primers
3339892	GTGATGCTGCCGATCCTGGTGCTGCCGATGGTGATGTTCACGATC	Design primers
3340695	CCCCCGCCCGGCCCGCGCCCGCACCGCGCCCGG	Design primers
3341281	GACGTCGATGTCGACGTGGACGTC	Design primers
3360406	CCGCCGCTGCCGCGGCCGGCGCCG	Design primers
3378002	CGGGCGATCATCGTGCGATGATCGTGCGATCAT	Design primers
3383191	CCGGCAGCC-CCGGCAGCC-CCGGCCGCC	Design primers
3391101	GCCTTCTTCGCCGGCGCCTTCTTGGCGGCCGGCTTCTCGGCCGGC	Design primers
3442491	CGCGACCACGACCGCCACGGCGAC	Design primers
3451134	CGGCC-CGGCC-AGGCC-AGGCC-AGGCC-AGGCC	Design primers
3459913	CCTCGGCGGCCTCGGCCGCCTCGGCCG	Design primers
3467726	GGCATCCCGGCCATCCCGGGCATCCCCGGCATCCCG	Design primers
3483074	CATCGGCAA-CCTCGGCAA-CCTCGGCAA-CCTCGGCAA	Design primers
3502356	GGTCTTCTTCGCCGGAGCCTTCTTGGCCGGAGCCTTCTTGGCCGG	Design primers
3502402	GCCTTCTTGGCGGGCGCCTTCTTGGCGACGGCCTTGGTGGCGGTC	Design primers
3502470	TGCCGGTGCCTTCTTGGCCGGAGCCTTCTTGGCGGGCGCCTTCTT	Design primers
3502557	CGCCGCCGTCTTCTTGGCGGGCGCCGCCTTCTTGGCCGGAGCCGCCTTCTTGGC	Design primers
3518561	GCCGCCGCCGCCGCGGCCGCGGCC	Design primers
3532811	GCTCAGCCGGGTCAGCCGGGTCAGCCG	Design primers
3539543	AGCGTTGCCCCCGTGTTGCCCCAGTGTTGCCCG	Design primers
3540740	GGCGAGCGCGAGGCCGAGGGCGAA	Design primers
3551020	AGCACG-AGCCCG-AGCCCG-AGCGCG	Design primers
3581190	GTCCGC-GTTCGC-GTTCGC-GTTCGC	Design primers
3602901	CGGGTC-CGGGTC-CGGCTC-CGGGTC	Design primers
3617877	TCCTGAACAGCGTTC-AGGTGAACAGCGTTC-AGGTGAACAGCGTTC-AGGTGAACAGCGTTC-AGGTGAACAGCGTTC	Design primers
3627525	ACCAGCGCCAGCACCAGGACCACC	Design primers
3653394	TCGGCGACGGCGTCGACGTCGGCC	Design primers
3657476	GAGCTCGAGCACGATCTCCAGCTC	Design primers
3658992	CCGGCGGGCCTGCGGGCCGGCTGG	Design primers
3659103	CCTCGGCCGGCTCCGCGACGACCGGCTCCGCGACGACCGGCTCCG	Design primers
3659379	CCGCCGCCTCGGTCGCCGCGTCGGTCGCTGCCTCGG	Design primers
3661055	CGGCGGCGCCGGCGGCGCCGGCGC	Design primers
3661383	CGCCCTTCTTGGCGGCGGTCTTCTTGGCAGCGGTCTTCTTGGCGG	Design primers
3661506	TCGCGGCGGCCTTCTTGGCCGGGGCCTTCTTGGCCGCGGCCTTCT	Design primers
3661736	GCGGGGGCCTTCTTCGCGGCGGCCTTCTTGGCGGCCGTCTTCTTCGCGGCGGTCTTCTTC	Design primers
3664507	CG-CG-TT-CG-CC-GC-GT-TC-GG-CG-CG-CT-CG-C	Design primers
3670229	GAGGCCCGGGGCCCTGAGACCGGGGGGCCTGAGACCGGGGGGCCT	Design primers
3675174	CCCAG-GTCAG-GTCAG-GTCAG-GTCAG-GTCAG	Design primers
3683998	GCCGCCGCCACCGACGCCGCCACC	Design primers
3684285	GTGCCC-GTGGCC-CTGCCC-GTGCCC-GTGGCC-CTGCCC-GTGCCC	Design primers
3684346	TCGTGC-CCGTGC-CCGTGC-CCGTGC	Design primers
3695427	CGGGTCGGGGCGGGGCTGGTCGGGA	Design primers
3708878	CGG-CTG-CTG-CTG-CGG-CGG-CTG-CTG	Design primers
3727154	CGTCCGCCTCCGCCTCCGCGGCCGCGGCCG	Design primers
3727720	GCGGCGACGGCGGCGTCGGAGGCG	Design primers
3731773	CGCCGACGCCGCCGAGGCCGCCGACGC	Design primers
3738595	CCACCAGGGCGACCACCAGGGCCGCCACCAGCACGA	Design primers
3744832	GGGTCGGGGACGGGTTCGGGGACGGGCTCG	Design primers
3787159	CCGGGGCCGGTGTACGCGCCTCCGCCGGGTCCCGTGTAGGCACCTCCGCCGGGTCCCGTGTAAGCGCCCCCG	Design primers
3806590	GCCGGCGCCGCCGCCGTCGCCGTC	Design primers
3820297	GCCGCCGACGACCGCGCCGGCGACGACGCCGATGCCGACGATCGC	Design primers
3826198	CTCACGCCCAGACGTACGCCCAGACGTACGCCCAGA	Design primers
3859967	TGCTGCTGCGGCTGCTGGTGCCGC	Design primers
3870579	GTGGCC-GTGGCC-GTGCCC-GTGGCC-GTGACC	Design primers
3886078	ACGTACTACCTGCCGTAGGAGCTACCTGCCGTAGGAGCTACCTGCCGT	Design primers
3897023	AG-CG-CG-AT-CG-CG-TG-CG-CG-AG-CG-GG	Design primers
3898569	CACCGACGCCAACCCCGACGGCAACACCGACGCCACCCCCGACGCCAC	Design primers
3924493	CCCGGCGAGCACCACGTCGAGCACCACGTCGAGCAC	Design primers
3926075	CACCGGCGCCGGCTCCGGCATCGG	Design primers
3957398	AGGGAACCGGC-GAGGAACCGGC-GAGGAACCGGC	Design primers
3986415	CCG-ACG-ACG-ACG-GCG-ACG-ACG-ACG-GCG-ACG	Design primers
3986479	CGACGCCGACACCGACGACGACGG	Design primers
3986509	GGA-CGG-CGA-CGA-GGA-CGC-CGA-CCA-CGA-CGG-CGT-CGA	Design primers
3986716	CGACGACGAGGACGAGGACGACGT	Design primers
3986764	GGACGAGGGCGAGGACGACGACGA	Design primers
3994158	ACGACGAGG-GCGACGAGG-GCGACGAGG-GCGACGAGG-GCGACGAGG	Design primers
4010675	CGGTCGACCGGCCGACCCGTCGAC	Design primers
4019629	CCGGGC-CCGGGC-CGGGGC-CCGGGC	Design primers
4033664	TCGGCGCGGCGGTCGGTGCGGCGGTCGGTGCGGCCG	Design primers
4034270	ACCTCGGCCTCGACCGCGACCTCG	Design primers
4034608	CTCGCCGCCTGAGCCTCGCCGTCTGAACCTCGCCGCCTGAGC	Design primers
4050055	CTCGCCACCGTCGTCCCCGTGGTCGTCGCCGTGGTCGTCCCCGTGGTCCTCGGCGCGGTCGTCCCCGTGGTCGTCCCCGCGGTCGTCCCCGTGGTCCTCGGCGCGGTCGTCCCCGTGGTC	Design primers
4092237	GCCGTCTCCTCGGCCACGGTCTCCTCGGCGGGCGCCTCCTCGACC	Design primers
4103891	CTCGTTCTCCTTCTCGGTCTCGTC	Design primers
4110447	GGCGGCCTTCTTGGCCGGGGCAGCCTTCTTCGCGGGCGCCGCCTTCTTGGCCGG	Design primers
4111945	CCCCTGACCGCTCCCCGACCGCCCCCCGGCCGC	Design primers
4119597	GGGCGAGGGCAAGGCCGAGTGCGA	Design primers
4126323	CGGGTAGGCAGGTAGGCAGGTAGG	Design primers
4160219	GTCCGGGTCGGGGCCCGGGTCGGG	Design primers
4176326	TTCCCCCTGGGTTCCCCTGGTTCCCCTGGG	Design primers
4177743	GGCTCGACGCGACCTGAGTCGACGCGACCTCAGTCGACGCGACCT	Design primers
4179830	GCC-GCC-GCC-CCC-GCC-GCC-GCC-TCC-GCC-GCC	Design primers
4183245	GCGCCGGCCCCGGCGGCGGGGCCG	Design primers
4199161	CCGTGCCCGTGGTCGTGCCCGTGG	Design primers
4204756	CGCGG-CGCGG-CACGG-TGCGG-CACGG	Design primers
4205794	CCGCCCCCGCCACCGTCCCCGCCA	Design primers
4207027	GCCGGCGCGGGCGCCCGCGGCGGC	Design primers
4216360	CGAGGAAGGCGGCCGCCAAGAAGGCGGCCACGAAGAAGACCGCCG	Design primers
4216406	CAAGAAGACCGCCGCCAAGAAGACGGCCACGAAGAAGACGGCCAC	Design primers
4222790	GCTGCTCGCGGCCGGCCTCCTTGCGGCCGGCCTCCTTGCGGCCGG	Design primers
4225566	GCCCGAGCGCCCGACCGCCCGAAC	Design primers
4231835	GC-GC-GA-GC-TC-GA-GC-GC-GA-GC-GC-GC	Design primers
4237451	CGCCTCCGTCGCCGCCGTCTCCTCCGT	Design primers
4264705	CGCCTGGGCCTGGGCCTGCGGCTGCGCCCG	Design primers
4266856	GGC-CGC-CGC-CGC-GGC-TGC-GGC-CGC	Design primers
4272925	GCCCGACTCGGCGCCGGACTCCGCGCCGGACTCGGGGCCGGACTCGGC	Design primers
4281458	GCC-ACC-ACC-GCC-ACC-GCC-GCC-GCC-ACC	Design primers
4344652	GGGCTCGACGGAGGGTACGACGGAGGGCTCGACGAC	Design primers
4354683	CGTGAT-CGTGAT-CATGAT-CGCGAT	Design primers
4358657	CCCGCGGCCTCGAACGACGTGGCCTCGAACCCGGCCGCCTCGAGC	Design primers
4398603	GCCGATGGCGGTGCCGATGCCGGGGCAGATCGCGGT	Design primers
4398650	CGCCGGCCCAGGCGCCGGCCTCGGCGCCCGCCCAGG	Design primers
4425488	GTACGGCTACGGGTATGGCTACGG	Design primers
4469840	CCGACCGGCTCCGCGACGCCGACCGGCTCCGCGTCACCCACCGGCTCGGCGTCGCCCACCGGCTCCGCGTCC	Design primers
4481557	GCCCGGGCGGCG-GCCCGGGCGGCG-GCTCGTGCGGCG-GCTCGGGCGGCG	Design primers
4484553	CGTCGGGGGCGTCGTCGGGTCCGTCGTCGGGTCCGT	Design primers
4484641	GGCGTCGGGGCCGCCGTCGAGGCCGCCGTCGGGGCG	Design primers
4492976	GCCGCGGCCGAGGCCGCGGCGGCG	Design primers
4498380	CTCGACCTCGCCTTCGACCCCGAC	Design primers
4518103	GGCCCCGACCCGGCCGCCGACCCGGGCCCCGGCCCG	Design primers
4528426	GGTGACCCTGCTCCCGGTGACCCTGCTGCCGGTGAGCCTGCGGCC	Design primers
4528918	CCGGGCTGCCGGCCGGGTTGTCGGCCGGGCGGCCGG	Design primers
4562080	CACCGGCCCAGAACCGGACCAGAACCGGACCAGAACCGGCCCGG	Design primers
4574500	CCGCCCGCG-GCGCCCGCG-CCGCCCGCG-CCGCCCGCG-CCGCCCGCG	Design primers
4579973	CGCCGACCGCCACGTCGACCACCACGTCGACCACCA	Design primers
4597840	GCTGGGTGCTCGGACGGGTGCTCGGACGGGTGCTCG	Design primers
4597926	GCCGTCCAGGTC-GCCGTCGGGGTC-GCCGTCGGGGTC-GCCGTCCGGGTC	Design primers
4605470	GGCACCGGCCCGGTCACCGGCCCGGTCACCTGCCCG	Design primers
4609448	GGGCCGACCTGCTCGGAGCCGACCTGCGTGGCGCGGACCTGCGCG	Design primers
4610158	CCGGCGGACGGG-CCGGCGGACGGG-CCGGCAGACGAG	Design primers
4629240	CAACTCGAGGGCAGGCAGCTCCCGGGCAGGCAGCTCGCGGGCAGG	Design primers
4629331	CCGTCGGTGCCGTCGCCGTCGGTGCCGTCACTGTCCGAGCCGTCGCCGTCGGTGGTGTCG	Design primers
4629392	TCGCGTCGCCGTCGGTCCCGTCCCCGTCGGTCCCGTCGGCGTCGC	Design primers
4654726	AGCCCGCCACGA-CCCCCGCCACGA-GCCCCGCCACGA-GCCCCGCCACGA-ACCCCGCCACGG	Design primers
4659446	CTCGACGACATCGACGACCTCGACGAG	Design primers
4661382	AGCCCGAGCCCAAGGCCGAGCCCG	Design primers
4669976	GCCACGGCCGCCCGCCGCGCGGCCGCCCGCCGCGCGGCCGCCCGC	Design primers
4678427	GCCGACGCCGCCGCCGTCGTCGAC	Design primers
4679068	CCGACACCGGCTCCCGCCAGGACACCGGCACCCGCCAGGACACCGGCTCCCGCC	Design primers
4687161	GCGACCACGCCGTGACCACGCCATGACCACGCC	Design primers
4690500	CGGCCACCGGGACGGGGACCGGGACGGGCACCGGGG	Design primers
4718777	CGCGAGCGCGATCGGGAGCGCGGG	Design primers
4726167	TGGTCG-AGGTCG-AGGTCG-AGGTCG	Design primers
4729437	GGCGGCCGCGGCGGCGTCGGCCGC	Design primers
4757986	CTGCTGCGGAGCAGCGAATGAGCACTGCTGCGGGGCAGCGTATGAGGGGAGCTGCGAAGCAGCGAATGAGGA	Design primers
4758059	AGCTGCGGGGCAGCGTATGAGGGGAGCTGCGAAGCAGCGAATGAGGAGAGCTGCGGAGCAGCGAAGGAGGAG	Design primers
4758601	GGCCGG-GGCCGG-TGCCGG-CGCCGG	Design primers
4763838	GCGGAG-CCGGAG-CCGGAG-CCGGAG	Design primers
4776713	TTCGACATCGACTTCTACGTCGAC	Design primers
4777159	CGAGGACCCGGC-CGAGGACCTGGC-GGAGGACCTGGC-GGAGGATCCGGC-GGAGGACCCGGC	Design primers
4799753	GGTCGCCGCGGCCGCCGCGGTCGTCGC	Design primers
4823174	CGGCCAGCCGGCGCCGCCCCCGTACGGCCAGCCCGCCCCGTCTCCGTACGGCCAGCCGGCGTCGCCTTCGTACGGCCAGCCCGCCCCGCCTCCGTACGGTCAGCCGGCGCCGCCCCCGTACGGCCAGCCCGCCCCGCCCCCGTA	Design primers
4825197	CAGGCCCAGAGTTTGGCCCAGAGTTAGGCCCAGAGT	Design primers
4831864	CTGGAGCTGGTGCGGGAGCTGCAG	Design primers
4833944	CGGCGTCGGAGTCGGCGGCGGCGC	Design primers
4834456	GGCCGAGCCGCCTGAGCCGCCTGAGCCGCCCGAGCCGCCCGAGCCGCCGGAGCG	Design primers
4837017	GCCGGGTCGCGAGCGGGTCGCGGCCGGGCAGCG	Design primers
4855996	GCCCTGGTTGCCCTGCTTGCCCTGCTT	Design primers
4856027	GGCTG-GCCCG-GCCGG-CCCGG-CCGGC-CC	Design primers
4866000	TGGGACGGGCGACATCGGACCGGGCGACATCGGACCGGGCGACAT	Design primers
4875343	GGGCCGCCGTGGCCGCCGGGGCCGCCG	Design primers
4949756	CGGGGTGGCTGACGTCGAACGGGTGGCTCACGTCGAAGGGGTGGCTCACGTCGAACGGGTGGCTCACGTCGAAGGGATGGCTCACGTCGA	Design primers
4956865	CTTCTCGGCCTTGTCGGCCTGCTCGGC	Design primers
4957705	CGCTGGTCGGGG-TGCTGGTCGGGG-TGCTGGTCGGCG	Design primers
4973040	CCGATGAGTACCCGATGAGCGCCCGATGAGCGCCCGATGAGCAT	Design primers
4978435	CGGGGCGCCGGGTCGCCGAGGCGC	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

1661

ACCCACCGCGGCCCCACGGCGGCCCCACGGCGG