Microsatellites /Tandem Repeats database

Genome: Nocardioides sp. JS614

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
4754GCACGCAAGGGGGGCTTC-GCACGCAAGGGGGGCTTC-GCACGCAAGGGGGGCTTCDesign primers
43091GGTCTCGGT-GGTCTCGGT-GGTCTCGGTDesign primers
231782GGTCACGTCGCT-GGTCACGTCGCT-GGTCACGTCGCTDesign primers
242891GGCCGCGGT-GGCCGCGGT-GGCCGCGGTDesign primers
267130CCGGTGACC-CCGGTGACC-CCGGTGACCDesign primers
329453CCGCCCCGG-CCGCCCCGG-CCGCCCCGGDesign primers
334986CGAAGGACA-CGAAGGACA-CGAAGGACADesign primers
348898GCCACC-GCCACC-GCCACC-GCCACCDesign primers
453132GCCCAGGACTGAGCT-GCCCAGGACTGAGCT-GCCCAGGACTGAGCTDesign primers
481761CGAGGACGG-CGAGGACGG-CGAGGACGG-CGAGGACGG-CGAGGACGG-CGAGGACGG-CGAGGACGGDesign primers
536444CCTTCGAGCGGACCGTGGCCGGC-CCTTCGAGCGGACCGTGGCCGGC-CCTTCGAGCGGACCGTGGCCGGCDesign primers
615616GGCCAGCAGGTC-GGCCAGCAGGTC-GGCCAGCAGGTCDesign primers
663436CTCTCGG-CTCTCGG-CTCTCGG-CTCTCGG-CTCTCGG-CTCTCGG-CTCTCGGDesign primers
712921GTAGGGCTGCTG-GTAGGGCTGCTG-GTAGGGCTGCTGDesign primers
1015205CGTCGGGGTGTC-CGTCGGGGTGTC-CGTCGGGGTGTCDesign primers
1321284CGGCACCCA-CGGCACCCA-CGGCACCCADesign primers
1524053CTGGTCCGGA-CTGGTCCGGA-CTGGTCCGGADesign primers
1711960CCTCGGCGC-CCTCGGCGC-CCTCGGCGC-CCTCGGCGCDesign primers
2145768GGTGTCTGG-GGTGTCTGG-GGTGTCTGGDesign primers
2292679GTCCGAA-GTCCGAA-GTCCGAA-GTCCGAA-GTCCGAA-GTCCGAA-GTCCGAADesign primers
2453257CTCGGG-CTCGGG-CTCGGG-CTCGGGDesign primers
2663950GACACCGGGCCT-GACACCGGGCCT-GACACCGGGCCTDesign primers
2929549GGCCAGCAGGTC-GGCCAGCAGGTC-GGCCAGCAGGTCDesign primers
3104867ACCGCG-ACCGCG-ACCGCG-ACCGCGDesign primers
3105608CGGGCACGG-CGGGCACGG-CGGGCACGG-CGGGCACGG-CGGGCACGG-CGGGCACGGDesign primers
3107287TCCATGCCG-TCCATGCCG-TCCATGCCG-TCCATGCCG-TCCATGCCG-TCCATGCCG-TCCATGCCG-TCCATGCCG-TCCATGCCG-TCCATGCCGDesign primers
3253144TTCTTGGCGGGTGCCGCC-TTCTTGGCGGGTGCCGCC-TTCTTGGCGGGTGCCGCCDesign primers
3253199TCTTCGCGGGTGCCGCCT-TCTTCGCGGGTGCCGCCT-TCTTCGCGGGTGCCGCCTDesign primers
3272066GGGTGCTGGC-GGGTGCTGGC-GGGTGCTGGCDesign primers
3483076TCGGCAACC-TCGGCAACC-TCGGCAACCDesign primers
3532813TCAGCCGGG-TCAGCCGGG-TCAGCCGGGDesign primers
3581193CGCGTT-CGCGTT-CGCGTT-CGCGTTDesign primers
3617880TGAACAGCGTTCAGG-TGAACAGCGTTCAGG-TGAACAGCGTTCAGG-TGAACAGCGTTCAGG-TGAACAGCGTTCAGGDesign primers
3675176CAGGT-CAGGT-CAGGT-CAGGT-CAGGTDesign primers
3684347CGTGCC-CGTGCC-CGTGCC-CGTGCCDesign primers
3886083CTACCTGCCGTAGGAG-CTACCTGCCGTAGGAG-CTACCTGCCGTAGGAGDesign primers
3957400GGAACCGGCGA-GGAACCGGCGA-GGAACCGGCGADesign primers
3994159CGACGAGGG-CGACGAGGG-CGACGAGGG-CGACGAGGG-CGACGAGGGDesign primers
4574510CGCCCGCGC-CGCCCGCGC-CGCCCGCGC-CGCCCGCGCDesign primers
4669980CGGCCGCCCGCCGCG-CGGCCGCCCGCCGCG-CGGCCGCCCGCCGCGDesign primers
4726168GGTCGA-GGTCGA-GGTCGA-GGTCGADesign primers
4763839CGGAGC-CGGAGC-CGGAGC-CGGAGCDesign primers

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