Microsatellites /Tandem Repeats database

Genome: Mycobacterium avium 104

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
53172GCCGGGGCCGGGGCCTGGGCCGGGGCCGGGGCCGGADesign primers
198032TGCCCAGGCCGGGGCTACCCAGGCCGGGGCTACCCAGGCCGGGGCDesign primers
268506GGGTCCAT-GGGTCCAT-GGGTCCAT-GGGTCCATDesign primers
528627CCGCCGTAC-CCGCCGTAC-CCGCCGTACDesign primers
660775CGCCGCAGAACGGCCCGAACAACGCGCCGCAGAACGGTCCCAACAACGCGCCGCAGAGCGGCCCGAACAACCDesign primers
727681CGCACGCTCGCGGGTG-AGCACGCTCGCGGGTG-AGCACGCTCGCGGGTG-AGCACGCTCGCGGGTGDesign primers
784380TTCCCCTG-TTCCCCTG-TTCCCCTG-TTCCCCTGDesign primers
786978GAGCGCCGAGTAGACCGCCGAGTAGACCGCCGAGTADesign primers
787025CGACCGCCGAGTAGACCGCCGAGTCGACCGCCGAGCGGACCGCCGAGTCGACCGCCGAGTCGACCGCCGAGTCGACCGCCGAGCGGACCGCCGAGTDesign primers
787122GACCGCCGAGCC-GACCGCCGAGTC-GACCGCCGAGTC-GACCGCCGAGCC-GACCGCCGAGGC-GACCGCCGAGTC-GACCGCCGAGCCDesign primers
787217AGACCGCCGAGT-AGACCGCCGAGC-CGACCGCCGAGT-CGACCGCCGAGT-CGACCGCCGAGTDesign primers
787278GACCGCCGAGCC-GACCGCCGAGCC-GACCGCCGAGTC-GACCGCCGAGCG-GACCGCCGAGTC-GACCGCCGAGCC-GACCGCCGAGTC-GACCGCCGAGCC-GACCGCCGAGCC-GACCGCCGAGCCDesign primers
787433GGACCGCCGAGCGGACCGCCGAGTCGACCGCCGAGCDesign primers
787482GACCGCCGAGTC-GACCGCCGAGCC-GACCGCCGAGCC-GACCGCCGAGCC-GACCGCCGAGCC-GACCGCCGAGTC-GACCGCCGAGCC-GACCGCCGAGTA-GACCGCCGAGTC-GACCGCCGAGCCDesign primers
916379TCCCCGGCGCGCGGCTCTCCTCGGCGCGCGGCTCTCCCCGGCGCGCGGCTCTCCCCGGCGAGCGGCTCDesign primers
916449CTCTGCCCGGCGAGCGTCTCTCCCCGGCGAGCGTCTCTCCCCGGCGAGCGTDesign primers
1309537TTCCTACAAGATCGAG-TTCCTACAAGATCGAG-TTCCTAAAAGATCGAG-TTCCTACGAGATCGAGDesign primers
1556557GGCGCGCCTCCTGCCGCGCCTCCTGCCGCGCCTCCTDesign primers
1706203GACTCCGAC-GACTCCGAC-GACTCCGACDesign primers
2182817GG-GG-GG-GG-GG-GG-GG-GG-GG-GG-GG-GGDesign primers
2222557ACCCATCA-ACCCATCA-ACCCATCADesign primers
2282059GTGACGCTCGACGGGCGCGGCGGAATGACGCTCGACAGGCGCGGCGGAATGACGCTCGACGGGCGCGGCGGADesign primers
2340317GAAGGCGTCCAAGAAGGCGTCCACGAAGGCCTCCAADesign primers
2838883CATGTGACTTTGACGTGTGACTTTGACGTGTGACTTTGADesign primers
2895547GTCCGGGAAA-GTCCGGGAAA-GTCCCGGAAADesign primers
2963567CTTTGGCGAGCTTCGGCGAGCTTTGGCGAGDesign primers
3302373TGCAACAGGTTCCGG-GGCAACAGGTTCCGG-CGCAACAGGTTCCGG-CGCAACAGGTTCCGGDesign primers
3425944CCGGGTGGA-CCGGGTGGA-CCGGGTGGADesign primers
3425985GCCGGGCGG-GCCGGGCGG-GCCGGGCGGDesign primers
3521476TCGCGTCGCCGGTCGCTTCGCCGGCCGCGTCGCCGGDesign primers
3581808GCCGCCGCCGGGGTACGG-CCCGCCGCCGGGGTACGG-CCCGCCGCCGGGGTACGGDesign primers
3767328GTAGTCCCCGTCGGTGTAGTCCGCGTCGGTGTAGTCCTCGTCGGTDesign primers
4175446AGCCCGGTTTGGCGCCGCCCGACGCCGGTTTGGCGCCGCCCGACGCCGGTTTGGCGCCGCCCGDesign primers
4306509GTTGCGGCCGGTTGCGGCGGGTTGCGGCGGDesign primers
4344228GTGGCTTTAAGTGTCTTTAAGTGGCTTTACDesign primers
4431658CCTTCTGCCCGCGAGCGTCACGTTTTGCCCGCGAGCGTCACGTTCTGCCCACGAGCGTCADesign primers
4484456GCCGGTGGAAGCCGGTTGAAGCCGGTTGAADesign primers
4739292GGTTGGTAGGTAGTCGTCGGGGGCTGGTAGGTCGTCGTCGGGGGCTGGTAGGTAGTCGTCGGCDesign primers
4777865GGGGCGA-CGGGCGA-CGGGCGA-CGGGCGA-CGGGCGA-CGGGCGADesign primers
4949298GCACCCAAGACCGAAGCGCCCAAGACCGAAGCGCCCAAGACCGAADesign primers
4955913GCCCGGTACTAGCGGTGG-GCCCGGTACTAGCGGTGG-GCCCGGTACTAGTGGTGGDesign primers
5099406GGCCGTGCTCGCCGCCGTGCTCGCGGCGGTGCTCGCGGGCGTGCTCGCGGCGGTGCTCGCGGGCGTGCTCGCDesign primers
5109765CCGTTCGACGGGCAGTTCGACGGGCCGTTCGCCGGGDesign primers
5140504CCGCGCCGAGCGTGGGGCCTCAGCGGCGCCGAGCGTGGGGGCTCAGCGGCGCCGAGCGTGGGGGCTCAGDesign primers
5328986CCGGCCCAA-CCGGCCCAA-CCGGCCCAADesign primers

Please help us improve this resource by reporting problems, suggestions etc.