Microsatellites /Tandem Repeats database

Genome: Acidothermus cellulolyticus 11B

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
189352GCCGTCGCCGAG-TCCGTCGCCGAG-TCCGTCGCCGAGDesign primers
189959CCGTCTCCGAGTCCGTCGCCGAGTCCGTCGCCGAGTDesign primers
191967GCCGTCGCCGAG-TCCGTCGCCGAG-TCCGTCGCCGAG-TCCGTCGCCGAGDesign primers
192586CCGTCTCCGAGTCCGTCGCCGAGTCCGTCGCCGAGTDesign primers
315036CTGAAGACGCGGCGAGCTGAAGAGGCGGCGAGCTGAAGACGCGGCGAGDesign primers
476622CGGGAATCTCCCAGGAATCTCCCGGCAATCTCCDesign primers
657183CCCGAG-CCCGAG-CCCGAG-CCCGAGDesign primers
660069CGTCGCCGTCTC-CGTCGCCGTCTC-CGTCGGCGTCTC-CGTCGGCGTCTCDesign primers
668228CCGACCCCCAGC-CCGACCCCCAGC-CCGACCCCCAGCDesign primers
668300CCGAGC-CCGAGC-CCGAGC-CCGAGC-CCGAGCDesign primers
722647CCCCAGCCGCGACCGTGCGCGGGTCACCCAGCCGCGACCGTGCGCGGGGCACCCAGCCGCGACCGTGCGCGGGGCDesign primers
820684GCCCATGCACATAGCAATGCAGCAGCCCATGCACATAGCAATTCAGCGACCCATGCACGTAGCAATGCAGCADesign primers
859354CAGCCGCCGCGGCCGGGACCATGG-TTGCCGCCGCGGCCGGGACCATGG-TTGCCGCCGCGGCCGGGACCATGGDesign primers
891286CGCGGGACGGCGTCCGGCCCGCGGGGAACGGCGTCCGGCCCGCGGGGAACGGCGTCCGGCCCGDesign primers
1004736ACCGGATCCTGACAGAATTCGGGG-GTCGGATCCTGACAGAATTCGGGG-GTCGGATCCTGACAGAATTCGGGGDesign primers
1104793GTCCCGGTGCCGCCGGCGAGCAGCCGTCCCGGTGCCGCCGGGGAACAGCCGTCCCGGTGCCGCCGGCGAGCAGCCDesign primers
1137767GAAGGCCGCGGCGAAGAAGGCCGCGGCAAAGAAGGCCGCGACGAADesign primers
1351842CGCCGGGGTTGGCCGGCTCGCCGGGGCTGGCCGGCTCGCCGGGGCTGGCCGGCTDesign primers
1453790CCGGCGACGGCCAATTCCGCCGACCGGAGACGGCCAATTCCGCCAACCGGAGACGGCCAATTCCGCCAADesign primers
1600262CGCCCCGGCGGGTCGTCT-CGCCCCGGCGGCTCGTCT-CGCCCCGGCGGCTCGTCT-CGCCCCGGCGGCTCGTCT-CGCCCCGGCGGCTCGTCTDesign primers
1602004GGCGGCCGTGGAATACG-AGCGGCCGTGGAATACG-AGCGGCCGTGGAATACG-AGCGGCCGTGGAATACGDesign primers
1630128GACGGA-GACGGA-GACGGA-GACGGADesign primers
1630174GCGACGGAGACGGCGACGGAGACAGGGACGGAGACGGGGACGGAGACGDesign primers
1632572CGGCGACGGAGA-CGGCGACGGAGA-CGGGGACGGAGADesign primers
1653410TGCGGCGGTAGGCCG-GGCGGCGGTAGGCCG-GGCGGCGGTAGGCCGDesign primers
1788280TGCCGCCTT-TGCCGCCTT-TGCCGCCTTDesign primers
1810371TATCCTCCCCCACCATCCGCCGGGTGTCCTCCCCCACCATCCGTCGGGTGTCCTCCCCCACCATCCGCCAGGDesign primers
1913329CTCGGG-CTCGGG-CTCGGG-CTCGGGDesign primers
1995993TCCCCGGCCGAA-GCCCCGGCCGAA-GCCCCGGCCGAA-GCCCCGGCCGAADesign primers
2046412CCTCGTTGCCGAAGCGGCGCC-TCTCGTTGCCGAAGCGGCGCC-TCTCGTTGCCGAAGCGGCACCDesign primers
2306828GCCCGT-CCCCGT-CCCCGT-CCCCGT-CCCCGT-CCCCGT-CCCCGT-CCCCGTDesign primers

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