Microsatellites /Tandem Repeats database

Genome: Acidothermus cellulolyticus 11B

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
191968CCGTCGCCGAGT-CCGTCGCCGAGT-CCGTCGCCGAGTDesign primers
657183CCCGAG-CCCGAG-CCCGAG-CCCGAGDesign primers
660087CGTCTCCGTCGG-CGTCTCCGTCGG-CGTCTCCGTCGGDesign primers
668228CCGACCCCCAGC-CCGACCCCCAGC-CCGACCCCCAGCDesign primers
668300CCGAGC-CCGAGC-CCGAGC-CCGAGC-CCGAGCDesign primers
859356GCCGCCGCGGCCGGGACCATGGTT-GCCGCCGCGGCCGGGACCATGGTT-GCCGCCGCGGCCGGGACCATGGTTDesign primers
1004738CGGATCCTGACAGAATTCGGGGGT-CGGATCCTGACAGAATTCGGGGGT-CGGATCCTGACAGAATTCGGGGGTDesign primers
1600274TCGTCTCGCCCCGGCGGC-TCGTCTCGCCCCGGCGGC-TCGTCTCGCCCCGGCGGC-TCGTCTCGCCCCGGCGGCDesign primers
1602005GCGGCCGTGGAATACGA-GCGGCCGTGGAATACGA-GCGGCCGTGGAATACGA-GCGGCCGTGGAATACGADesign primers
1630128GACGGA-GACGGA-GACGGA-GACGGADesign primers
1653411GCGGCGGTAGGCCGG-GCGGCGGTAGGCCGG-GCGGCGGTAGGCCGGDesign primers
1788280TGCCGCCTT-TGCCGCCTT-TGCCGCCTTDesign primers
1913329CTCGGG-CTCGGG-CTCGGG-CTCGGGDesign primers
1995994CCCCGGCCGAAG-CCCCGGCCGAAG-CCCCGGCCGAAG-CCCCGGCCGAAGDesign primers
2306829CCCGTC-CCCGTC-CCCGTC-CCCGTC-CCCGTC-CCCGTC-CCCGTC-CCCGTCDesign primers

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